HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:264.7 nTPM
HPA Brain:432.7 nTPM
GTEx:264.7 nTPM
FANTOM5:547.5 Scaled Tags Per Million
Pig:281.1 nTPM
Mouse:629.5 nTPM
Allen mouse:15.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012947
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 432.7
Sample id Sample description nTPM
Hippocampus
nTPM: 337.6
1898 Male, age 80, left hemisphere 404.8
2621 Female, age 67, right hemisphere 393.0
2148 Female, age 91, left hemisphere 351.4
1855 Male, age 76, left hemisphere 295.6
2529 Female, age 94, left hemisphere 292.2
1911 Female, age 85, right hemisphere 288.8
Dentate gyrus
nTPM: 361.7
2530 Female, age 94, left hemisphere 464.1
1927 Female, age 91, both hemispheres 399.9
2531 Female, age 67, both hemispheres 353.8
2528 Male, age 74, both hemispheres 328.4
2246 Female, age 85, both hemispheres 312.8
2010 Male, age 76, both hemispheres 311.3
Entorhinal gyrus
nTPM: 432.7
2613 Female, age 94, left hemisphere 637.4
2764 Male, age 80, right hemisphere 442.1
1938 Female, age 85, left hemisphere 423.4
1787 Male, age 76, left hemisphere 414.3
2686 Male, age 75, right hemisphere 414.3
2117 Female, age 91, right hemisphere 265.0
Hippocampus, CA1
nTPM: 358.9
2749 Male, age 80, left hemisphere 523.1
2527 Male, age 74, both hemispheres 372.0
2082 Female, age 91, right hemisphere 347.1
1873 Female, age 85, both hemispheres 334.6
2045 Male, age 76, both hemispheres 217.9
Hippocampus, CA2
nTPM: 357.0
2437 Female, age 94, left hemisphere 415.5
1892 Male, age 76, both hemispheres 401.1
1963 Male, age 80, left hemisphere 384.0
2113 Female, age 91, right hemisphere 346.2
2249 Male, age 74, both hemispheres 320.9
1940 Female, age 85, left hemisphere 274.1
Hippocampus, CA3
nTPM: 359.0
2861 Female, age 67, both hemispheres 509.6
2137 Male, age 80, left hemisphere 422.7
2620 Female, age 94, left hemisphere 383.4
1867 Male, age 76, both hemispheres 305.5
2436 Male, age 74, both hemispheres 280.5
1891 Female, age 85, both hemispheres 252.2
Parahippocampal cortex
nTPM: 387.9
2622 Female, age 67, right hemisphere 485.9
2245 Female, age 91, both hemispheres 473.3
2692 Male, age 74, both hemispheres 402.2
1990 Female, age 91, right hemisphere 401.7
1933 Female, age 85, both hemispheres 387.8
2250 Female, age 67, right hemisphere 387.8
2693 Female, age 94, both hemispheres 375.2
1850 Male, age 80, both hemispheres 371.3
2532 Female, age 72, left hemisphere 321.7
2018 Male, age 76, both hemispheres 272.0
Perirhinal gyrus
nTPM: 402.1
1847 Female, age 91, left hemisphere 524.9
1794 Male, age 80, right hemisphere 401.0
2521 Female, age 94, right hemisphere 396.8
2848 Male, age 76, right hemisphere 347.8
1841 Female, age 85, right hemisphere 340.3
Subiculum
nTPM: 309.2
2619 Male, age 74, both hemispheres 380.4
1977 Female, age 85, both hemispheres 352.7
2438 Female, age 94, left hemisphere 332.1
1901 Male, age 80, both hemispheres 312.9
2729 Female, age 91, right hemisphere 251.2
2042 Male, age 76, both hemispheres 225.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 264.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 264.7
Samples: 255

Max nTPM: 743.4
Min nTPM: 34.5
Std nTPM: 120.6
Median nTPM: 264.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 743.4
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 598.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 550.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 540.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 531.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 525.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 508.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 502.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 481.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 480.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 466.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 547.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 547.5
FF:10169-103B7 60 years, female 718.6
FF:10153-102I9 76 years, female 376.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 281.1
Pig sample Sample description nTPM
Subiculum
nTPM: 228.8
Samples: 4

Max nTPM: 331.8
Min nTPM: 176.7
Sample A Female 331.8
Sample B Female 196.4
Sample C Male 210.1
Sample D Male 176.7
Dorsal hippocampus
nTPM: 281.1
Samples: 4

Max nTPM: 374.5
Min nTPM: 230.4
Sample A Female 374.5
Sample B Female 284.9
Sample C Male 230.4
Sample D Male 234.6
Entorhinal cortex
nTPM: 249.7
Samples: 4

Max nTPM: 268.2
Min nTPM: 227.8
Sample A Female 250.3
Sample B Female 268.2
Sample C Male 252.6
Sample D Male 227.8
Ventral hippocampus
nTPM: 245.6
Samples: 4

Max nTPM: 294.4
Min nTPM: 174.0
Sample A Female 247.6
Sample B Female 174.0
Sample C Male 294.4
Sample D Male 266.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 629.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 629.6
Samples: 4

Max nTPM: 698.9
Min nTPM: 594.2
Sample A Male 594.2
Sample B Male 698.9
Sample C Female 607.3
Sample D Female 617.8
Hippocampal formation
nTPM: 596.9
Samples: 4

Max nTPM: 639.8
Min nTPM: 550.6
Sample A Male 639.8
Sample B Male 566.7
Sample C Female 550.6
Sample D Female 630.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
1004 Antisense, RP_Baylor_103022, Mouse strain C57BL/6J (56 days, male) 15.4

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