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  • TISSUE

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  • STMN3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:245.5 nTPM
HPA Brain:332.7 nTPM
GTEx:245.5 nTPM
Pig:263.6 nTPM
Mouse:556.3 nTPM
Allen mouse:15.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

332.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 270.3
1961 Female, age 42, unknown 271.8
2226 Male, age 75, left hemisphere 268.8
Dorsomedial nucleus
nTPM: 266.6
1989 Male, age 62, unknown 346.2
2017 Female, age 42, unknown 229.8
2041 Female, age 72, unknown 223.9
Lateral hypothalamic area
nTPM: 332.7
1791 Male, age 80, right hemisphere 365.1
2228 Male, age 66, unknown 343.7
2271 Male, age 75, both hemispheres 312.6
2412 Male, age 62, unknown 309.4
Mammillary body
nTPM: 264.2
1923 Female, age 72, unknown 373.8
2413 Male, age 66, unknown 298.7
1834 Female, age 42, unknown 231.6
1948 Female, age 72, unknown 225.7
1945 Male, age 80, right hemisphere 191.0
Paraventricular nucleus
nTPM: 207.0
2700 Male, age 62, unknown 207.0
Preoptic area
nTPM: 266.3
1907 Male, age 80, right hemisphere 342.6
1861 Female, age 42, unknown 266.6
2414 Female, age 72, unknown 189.7
Supraoptic nucleus
nTPM: 189.1
2835 Female, age 72, unknown 244.5
1894 Female, age 72, unknown 174.3
2043 Male, age 62, unknown 148.5
Ventromedial nucleus
nTPM: 287.1
1982 Female, age 72, unknown 328.3
1822 Female, age 42, unknown 246.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

245.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 245.5
Samples: 257

Max nTPM: 434.9
Min nTPM: 72.6
Std nTPM: 76.0
Median nTPM: 236.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 434.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 431.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 417.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 416.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 400.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 397.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 393.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 383.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 380.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 375.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 374.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 370.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 367.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 366.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 366.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 363.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 363.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 361.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 360.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 360.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 357.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 355.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 353.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 353.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 352.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 352.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 352.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 350.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 348.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 348.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 347.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 343.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 341.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 341.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 340.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 339.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 339.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 339.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 339.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 338.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 336.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 336.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 329.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 329.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 328.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 327.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 326.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 322.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 315.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 311.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 311.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 308.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 307.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 307.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 307.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 304.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 302.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 302.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 302.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 300.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 299.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 298.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 298.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 298.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 295.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 295.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 295.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 295.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 295.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 293.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 291.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 290.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 289.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 289.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 288.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 284.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 282.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 281.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 280.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 280.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 280.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 277.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 275.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 275.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 274.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 273.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 273.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 272.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 271.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 270.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 269.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 269.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 268.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 267.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 266.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 264.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 264.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 263.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 263.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 262.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 262.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 261.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 261.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 259.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 259.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 259.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 258.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 258.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 258.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 257.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 257.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 257.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 256.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 254.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 253.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 252.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 250.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 250.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 249.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 247.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 246.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 244.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 243.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 243.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 242.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 242.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 240.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 240.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 236.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 236.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 236.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 236.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 234.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 234.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 233.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 233.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 232.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 232.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 231.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 231.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 231.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 229.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 229.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 229.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 228.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 228.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 227.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 227.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 227.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 227.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 226.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 226.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 226.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 224.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 224.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 223.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 222.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 219.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 219.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 218.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 218.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 217.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 216.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 216.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 216.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 215.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 215.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 215.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 215.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 214.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 213.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 213.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 211.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 211.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 211.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 211.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 210.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 210.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 209.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 209.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 208.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 208.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 207.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 205.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 205.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 205.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 205.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 204.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 204.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 203.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 203.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 203.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 202.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 202.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 201.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 199.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 198.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 195.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 193.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 192.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 190.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 189.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 189.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 188.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 187.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 187.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 187.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 185.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 185.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 184.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 183.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 183.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 181.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 181.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 180.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 177.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 176.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 173.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 165.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 163.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 160.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 159.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 158.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 154.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 153.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 151.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 150.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 149.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 147.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 147.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 143.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 139.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 138.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 138.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 137.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 136.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 133.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 129.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 126.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 123.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 121.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 118.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 118.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 113.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 112.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 112.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 109.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 97.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 96.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 95.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 92.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 92.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 89.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 88.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 85.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 73.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 72.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

263.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 263.6
Samples: 4

Max nTPM: 375.9
Min nTPM: 220.8
Sample A Female 375.9
Sample B Female 236.5
Sample C Male 220.8
Sample D Male 221.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

556.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 556.3
Samples: 4

Max nTPM: 676.4
Min nTPM: 477.1
Sample A Male 565.8
Sample B Male 676.4
Sample C Female 506.0
Sample D Female 477.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.5
1004 Antisense, RP_Baylor_103022, Mouse strain C57BL/6J (56 days, male) 15.5

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