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  • TISSUE

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  • SIPA1L1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:11.7 nTPM
HPA Brain:66.5 nTPM
GTEx:11.7 nTPM
Pig:23.6 nTPM
Mouse:31.2 nTPM
Allen mouse:2.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.5
1961 Female, age 42, unknown 59.6
2226 Male, age 75, left hemisphere 51.5
Dorsomedial nucleus
nTPM: 44.1
2017 Female, age 42, unknown 56.4
2041 Female, age 72, unknown 46.5
1989 Male, age 62, unknown 29.6
Lateral hypothalamic area
nTPM: 45.7
2412 Male, age 62, unknown 49.7
1791 Male, age 80, right hemisphere 45.8
2271 Male, age 75, both hemispheres 44.5
2228 Male, age 66, unknown 43.0
Mammillary body
nTPM: 38.2
2413 Male, age 66, unknown 41.7
1834 Female, age 42, unknown 39.2
1923 Female, age 72, unknown 37.8
1948 Female, age 72, unknown 37.1
1945 Male, age 80, right hemisphere 35.1
Paraventricular nucleus
nTPM: 48.8
2700 Male, age 62, unknown 48.8
Preoptic area
nTPM: 42.4
1907 Male, age 80, right hemisphere 45.5
1861 Female, age 42, unknown 43.5
2414 Female, age 72, unknown 38.0
Supraoptic nucleus
nTPM: 53.4
1894 Female, age 72, unknown 56.1
2043 Male, age 62, unknown 52.8
2835 Female, age 72, unknown 51.3
Ventromedial nucleus
nTPM: 66.5
1982 Female, age 72, unknown 71.7
1822 Female, age 42, unknown 61.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 11.7
Samples: 257

Max nTPM: 52.0
Min nTPM: 4.7
Std nTPM: 4.9
Median nTPM: 10.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 52.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 41.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 34.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 31.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 30.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 26.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 22.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 20.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 20.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 18.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 18.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 17.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 17.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 17.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 16.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 16.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 16.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 16.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 16.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 16.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 16.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 15.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 15.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 15.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 15.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 15.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 15.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 15.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 15.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 15.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 14.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 14.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 14.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 14.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 14.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 14.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 14.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 14.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 14.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 14.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 14.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 14.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 14.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 14.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 13.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 13.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 13.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 13.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 13.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 13.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 13.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 13.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 13.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 13.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 13.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 13.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 13.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 13.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 13.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 13.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 13.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 12.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 12.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 12.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 12.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 12.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 12.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 12.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 12.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 12.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 12.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 12.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 12.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 12.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 12.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 12.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 12.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 12.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 12.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 12.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 12.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 12.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 12.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 12.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 12.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 12.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 12.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 12.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 12.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 12.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 12.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 11.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 11.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 11.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 11.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 11.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 11.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 11.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 11.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 11.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 11.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 11.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 11.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 11.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 11.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 11.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 11.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 11.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 11.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 11.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 11.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 11.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 11.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 11.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 11.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 11.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 10.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 10.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 10.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 10.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 10.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 10.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 10.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 10.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 10.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 10.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 10.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 10.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 10.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 10.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 10.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 10.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 10.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 10.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 10.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 10.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 10.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 10.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 10.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 10.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 10.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 10.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 10.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 10.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 10.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 10.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 10.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 10.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 10.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 10.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 10.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 10.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 10.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 10.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 9.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 9.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 9.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 9.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 9.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 9.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 9.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 9.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 9.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 9.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 9.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 9.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 9.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 9.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 9.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 9.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 9.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 9.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 9.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 9.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 9.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 9.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 9.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 9.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 9.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 9.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 9.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 9.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 8.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 8.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 8.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 8.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 8.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 8.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 8.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 8.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 8.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 8.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 8.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 8.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 8.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 8.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 8.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 8.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 8.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 8.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 8.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 8.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 8.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 8.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 8.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 8.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 8.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 8.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 8.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 7.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 7.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 7.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 7.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 7.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 7.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 7.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 7.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 7.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 7.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 7.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 7.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 7.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 7.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 7.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 6.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 6.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 6.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 6.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 6.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 6.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 6.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 6.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 6.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 6.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 6.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 6.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 6.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 6.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 6.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 5.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 5.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 5.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 5.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 5.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 5.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 23.6
Samples: 4

Max nTPM: 26.2
Min nTPM: 18.7
Sample A Female 23.8
Sample B Female 18.7
Sample C Male 26.2
Sample D Male 25.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 31.2
Samples: 4

Max nTPM: 34.8
Min nTPM: 29.7
Sample A Male 30.0
Sample B Male 29.7
Sample C Female 30.4
Sample D Female 34.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.4
70302081 Antisense, RP_050607_03_E08, Mouse strain C57BL/6J (56 days, male) 4.5
74511986 Antisense, RP_060220_03_C11, Mouse strain C57BL/6J (56 days, male) 0.3

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