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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:538.1 nTPM
HPA Brain:1850.5 nTPM
GTEx:538.1 nTPM
Pig:703.0 nTPM
Mouse:1260.4 nTPM
Allen mouse:20.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1850.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1372.8
2226 Male, age 75, left hemisphere 1586.8
1961 Female, age 42, unknown 1158.8
Dorsomedial nucleus
nTPM: 1335.7
1989 Male, age 62, unknown 1480.3
2041 Female, age 72, unknown 1404.2
2017 Female, age 42, unknown 1122.7
Lateral hypothalamic area
nTPM: 1526.6
2271 Male, age 75, both hemispheres 1899.2
1791 Male, age 80, right hemisphere 1843.2
2228 Male, age 66, unknown 1373.7
2412 Male, age 62, unknown 990.2
Mammillary body
nTPM: 1525.2
1923 Female, age 72, unknown 1947.9
1945 Male, age 80, right hemisphere 1480.4
2413 Male, age 66, unknown 1455.9
1834 Female, age 42, unknown 1428.4
1948 Female, age 72, unknown 1313.3
Paraventricular nucleus
nTPM: 1133.1
2700 Male, age 62, unknown 1133.1
Preoptic area
nTPM: 1212.5
1861 Female, age 42, unknown 1258.7
1907 Male, age 80, right hemisphere 1207.2
2414 Female, age 72, unknown 1171.7
Supraoptic nucleus
nTPM: 1850.5
1894 Female, age 72, unknown 2144.4
2043 Male, age 62, unknown 1999.5
2835 Female, age 72, unknown 1407.5
Ventromedial nucleus
nTPM: 1447.8
1982 Female, age 72, unknown 1579.6
1822 Female, age 42, unknown 1316.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

538.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 538.1
Samples: 257

Max nTPM: 1196.2
Min nTPM: 230.2
Std nTPM: 174.4
Median nTPM: 527.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1196.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1167.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1003.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 989.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 968.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 948.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 943.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 923.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 916.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 907.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 906.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 900.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 855.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 852.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 846.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 840.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 828.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 824.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 799.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 798.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 792.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 791.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 785.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 779.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 778.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 777.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 775.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 774.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 772.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 769.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 765.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 763.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 762.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 759.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 757.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 749.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 743.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 727.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 726.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 699.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 694.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 691.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 690.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 686.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 678.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 678.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 667.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 666.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 664.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 661.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 660.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 658.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 658.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 657.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 654.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 651.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 650.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 650.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 648.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 647.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 645.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 644.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 643.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 640.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 636.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 630.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 630.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 630.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 629.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 626.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 623.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 623.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 619.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 616.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 614.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 607.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 600.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 599.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 599.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 595.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 595.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 590.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 589.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 589.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 587.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 586.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 586.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 585.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 584.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 584.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 583.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 583.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 580.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 578.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 576.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 574.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 574.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 571.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 571.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 571.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 566.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 563.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 562.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 562.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 561.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 561.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 560.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 558.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 557.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 557.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 557.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 556.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 555.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 553.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 552.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 552.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 552.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 551.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 547.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 544.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 541.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 540.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 539.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 538.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 538.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 536.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 535.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 534.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 527.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 525.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 524.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 520.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 519.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 519.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 518.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 517.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 517.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 514.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 512.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 511.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 510.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 509.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 508.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 507.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 499.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 492.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 488.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 488.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 487.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 487.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 487.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 483.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 476.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 473.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 471.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 470.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 469.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 465.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 465.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 464.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 463.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 461.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 461.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 455.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 454.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 452.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 450.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 444.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 441.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 440.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 437.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 437.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 437.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 436.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 436.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 434.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 434.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 433.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 429.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 427.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 425.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 424.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 417.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 414.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 413.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 411.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 410.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 406.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 405.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 404.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 403.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 396.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 395.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 389.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 388.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 388.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 386.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 386.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 383.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 383.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 383.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 382.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 381.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 376.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 376.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 374.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 374.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 374.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 371.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 369.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 368.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 365.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 363.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 361.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 361.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 358.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 357.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 356.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 355.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 354.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 353.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 353.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 351.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 351.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 348.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 347.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 345.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 344.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 342.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 340.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 335.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 333.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 333.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 331.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 331.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 330.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 326.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 325.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 322.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 319.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 319.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 308.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 302.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 301.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 299.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 297.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 297.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 292.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 283.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 275.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 274.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 267.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 265.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 264.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 256.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 250.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 230.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

703.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 703.0
Samples: 4

Max nTPM: 831.3
Min nTPM: 493.1
Sample A Female 831.3
Sample B Female 682.2
Sample C Male 805.4
Sample D Male 493.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1260.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1260.4
Samples: 4

Max nTPM: 1389.8
Min nTPM: 1186.4
Sample A Male 1268.7
Sample B Male 1389.8
Sample C Female 1196.8
Sample D Female 1186.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 20.3
70919346 Antisense, RP_050713_01_B06, Mouse strain C57BL/6J (56 days, male) 26.6
846 Antisense, RP_Baylor_102983, Mouse strain C57BL/6J (56 days, male) 14.0
847 Antisense, RP_Baylor_102983, Mouse strain C57BL/6J (56 days, male) 12.2

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