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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • RPL12
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN66 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM10 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1049.4 nTPM
HPA Brain:405.6 nTPM
GTEx:1049.4 nTPM
FANTOM5:12.1 Scaled Tags Per Million
Macaque:262.0 nTPM
Mouse:3.2 nTPM
Rat:52.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 35138
Sample Intensity
Spinal cord_01
43206
Spinal cord_02
37045
Spinal cord_03
42835
Spinal cord_04
51085
Spinal cord_05
32553
Spinal cord_06
33231
Spinal cord_07
29264
Spinal cord_08
9276

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

405.6
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 370.8
2193 Male, age 75, both hemispheres 422.5
2818 Female, age 79, both hemispheres 364.8
2819 Male, age 47, both hemispheres 348.2
2734 Male, age 80, both hemispheres 347.4
Cervical spinal cord, central gray
nTPM: 304.5
1981 Female, age 72, midline 374.6
2565 Male, age 75, midline 346.5
2048 Male, age 55, midline 286.2
2194 Female, age 79, both hemispheres 257.8
2816 Male, age 47, midline 257.2
Cervical spinal cord, dorsal horn
nTPM: 304.4
2173 Female, age 72, unknown 379.7
2069 Male, age 47, both hemispheres 369.4
2296 Male, age 66, both hemispheres 333.3
1877 Male, age 55, unknown 295.0
2721 Male, age 90, both hemispheres 239.0
2297 Male, age 75, both hemispheres 210.2
Cervical spinal cord, ventral horn
nTPM: 382.7
2098 Female, age 72, unknown 498.0
2809 Male, age 90, both hemispheres 478.6
2480 Male, age 75, both hemispheres 474.8
2295 Male, age 66, both hemispheres 374.0
2068 Male, age 55, unknown 274.8
2820 Female, age 79, both hemispheres 195.9
Dorsal funiculus (white matter)
nTPM: 365.3
2064 Female, age 79, both hemispheres 383.9
2810 Male, age 90, both hemispheres 382.8
2128 Male, age 75, both hemispheres 379.8
2817 Male, age 47, both hemispheres 364.3
2812 Male, age 66, both hemispheres 315.9
Lateral funiculus (white matter)
nTPM: 405.6
2192 Male, age 75, both hemispheres 442.4
2094 Female, age 79, both hemispheres 412.6
2294 Male, age 66, both hemispheres 404.1
2099 Male, age 90, both hemispheres 363.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1049.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1049.4
Samples: 204

Max nTPM: 2440.2
Min nTPM: 360.5
Std nTPM: 347.8
Median nTPM: 1001.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 2440.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2329.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2102.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2030.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1982.3
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 1952.3
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 1928.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1817.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1773.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1763.9
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1709.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1660.0
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1655.8
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1545.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1534.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1530.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1517.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1501.4
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1499.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1486.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1478.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 1470.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1469.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1466.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1463.5
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1460.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1413.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1402.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1398.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1372.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1364.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1357.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1351.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1338.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1326.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1309.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1306.1
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 1295.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1294.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1285.1
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1282.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1276.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1275.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1253.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1246.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1243.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1235.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1233.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1224.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1223.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1220.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1211.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1210.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1206.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1203.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1198.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1197.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1191.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1191.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1179.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1178.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1171.3
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1171.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1170.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1167.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1167.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1162.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1157.1
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1154.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1152.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1149.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1146.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1145.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1144.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1132.5
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1126.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1124.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1122.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1115.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1110.6
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1107.4
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1080.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1076.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1070.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1069.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1066.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1059.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1055.0
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1050.3
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1049.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1045.5
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1037.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1034.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1031.3
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1028.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1026.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1023.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1017.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1014.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1010.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1008.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1004.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 999.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 996.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 995.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 992.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 986.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 983.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 976.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 974.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 973.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 972.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 961.1
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 956.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 951.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 949.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 947.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 947.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 942.2
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 940.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 936.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 933.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 916.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 914.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 912.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 912.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 911.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 911.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 909.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 904.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 899.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 889.5
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 885.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 879.9
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 879.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 876.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 868.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 866.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 863.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 862.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 861.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 860.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 848.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 848.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 844.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 841.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 840.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 833.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 827.0
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 822.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 818.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 799.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 797.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 797.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 790.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 789.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 788.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 783.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 778.2
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 770.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 767.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 754.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 751.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 745.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 733.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 732.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 727.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 727.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 720.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 717.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 712.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 711.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 708.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 703.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 695.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 694.2
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 693.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 692.1
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 688.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 681.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 680.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 678.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 674.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 668.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 655.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 645.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 641.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 641.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 635.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 635.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 621.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 614.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 613.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 611.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 601.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 572.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 563.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 558.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 550.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 546.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 481.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 476.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 449.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 360.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

12.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 12.1
FF:10181-103D1 60 years, female 17.4
FF:10159-103A6 76 years, female 6.8

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

262.0
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 177.4
Samples: 2

Max nTPM: 236.7
Min nTPM: 118.1
Sample A 118.1
Sample B 236.7
Ventral spinal cord
nTPM: 262.0
Samples: 1

Max nTPM: 262.0
Min nTPM: 262.0
Sample A 262.0

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.2
Mouse sample Sample description nTPM
Spinal cord
nTPM: 3.2
Samples: 4

Max nTPM: 3.3
Min nTPM: 3.1
Sample A 3.1
Sample B 3.2
Sample C 3.2
Sample D 3.3

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.3
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 52.3
Samples: 4

Max nTPM: 59.3
Min nTPM: 40.8
Sample A 50.9
Sample A 58.1
Sample A 40.8
Sample A 59.3

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