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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • MBP
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:6879.4 nTPM
GTEx:13873.6 nTPM
FANTOM5:3671.2 Scaled Tags Per Million
Macaque:41.8 nTPM
Pig:9676.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6879.4
Sample id Sample description nTPM
Putamen
nTPM: 6879.4
2647 Male, age 75, left hemisphere 13382.0
2489 Female, age 72, unknown 10211.2
1829 Male, age 74, unknown 9542.4
1937 Female, age 91, right hemisphere 5475.9
2466 Female, age 79, unknown 4339.6
2482 Female, age 94, left hemisphere 3737.3
1838 Male, age 80, right hemisphere 1467.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13873.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 13873.6
Samples: 254

Max nTPM: 71575.0
Min nTPM: 821.4
Std nTPM: 11192.3
Median nTPM: 10758.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 71575.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 67584.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 61143.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 52723.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 51495.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 50814.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 44921.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 42685.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 42627.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 42608.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 41228.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 40011.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 36507.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 35374.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 33780.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 33017.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 32599.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 31223.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 30443.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 30181.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 30081.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 29879.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 28479.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 28298.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 25469.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 25006.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 24563.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24034.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 23883.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 23563.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 23170.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 23149.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 23002.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 22971.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 22836.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 22817.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 22603.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22158.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 21973.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 21942.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 21814.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21726.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 21646.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 21521.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 21292.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21105.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21001.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 20784.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20638.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 20559.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 20130.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 19820.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 19506.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 19444.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 19361.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 19209.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 19128.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 18503.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 18356.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 18144.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 17869.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17687.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 17640.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 17489.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 17403.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 17172.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16998.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 16983.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 16627.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 16477.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 16381.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 16369.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 15997.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 15917.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 15867.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 15628.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 15565.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15400.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15088.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 15032.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15023.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 14928.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14733.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 14724.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14631.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 14621.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 14585.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 14401.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 14263.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 13921.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 13873.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 13852.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13544.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13438.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 13258.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13047.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13036.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 13007.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 12994.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 12953.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 12790.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 12785.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12680.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12548.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 12503.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 12316.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12250.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 12214.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12180.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 12147.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 12089.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 11992.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 11972.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11887.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 11887.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 11866.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 11745.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11658.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 11539.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11519.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 11321.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 11282.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 11262.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 11156.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11006.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10921.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 10764.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 10753.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 10734.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 10581.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 10432.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 10361.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10358.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10355.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10336.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 10291.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 10220.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10143.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10130.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 10009.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9900.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 9835.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 9799.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 9692.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 9635.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9622.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 9586.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9501.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 9489.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9485.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 9445.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9431.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9422.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 9357.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 9246.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 9237.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9075.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 9057.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 8915.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8872.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 8814.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8763.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 8755.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 8602.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8539.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 8279.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 8275.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 8223.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8216.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 8197.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8136.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 8013.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 7917.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 7845.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 7842.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 7695.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 7675.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7623.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7457.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 7435.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 7402.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7390.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 7375.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 7368.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7282.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7275.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 7273.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7108.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 6798.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6651.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6646.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 6640.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 6623.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6621.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6574.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 6560.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6436.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 6348.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6329.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 6291.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6290.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6283.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 6242.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 6020.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5958.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 5945.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 5670.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 5336.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 5280.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 5278.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 5243.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5215.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 5073.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5052.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5040.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 4986.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 4883.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 4724.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 4542.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 4353.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 4348.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 4241.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 4193.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 4184.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 4156.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 4050.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3805.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 3790.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3769.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 3571.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3513.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 3427.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3390.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 3346.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 3231.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3094.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3076.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 3071.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 2986.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 2974.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 2867.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 2796.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2568.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2268.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2190.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 2085.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 2069.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1989.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1797.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1440.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1407.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1402.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1045.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 821.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3671.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 3671.2
FF:10176-103C5 60 years, female 3671.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.8
Macaque sample Sample description nTPM
Putamen
nTPM: 41.8
Samples: 2

Max nTPM: 45.3
Min nTPM: 38.3
Sample A 45.3
Sample B 38.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9676.3
Pig sample Sample description nTPM
Putamen
nTPM: 9676.3
Samples: 3

Max nTPM: 14873.3
Min nTPM: 4983.7
Sample B Female 4983.7
Sample C Male 9171.9
Sample D Male 14873.3

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