HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:438.7 nTPM
HPA Brain:116.6 nTPM
GTEx:438.7 nTPM
FANTOM5:46.4 Scaled Tags Per Million
Pig:328.5 nTPM
Mouse:716.8 nTPM
Allen mouse:11.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000857
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 116.6
Sample id Sample description nTPM
Hippocampus
nTPM: 109.8
2529 Female, age 94, left hemisphere 125.4
2621 Female, age 67, right hemisphere 119.8
1898 Male, age 80, left hemisphere 113.4
1855 Male, age 76, left hemisphere 111.8
1911 Female, age 85, right hemisphere 96.6
2148 Female, age 91, left hemisphere 91.8
Dentate gyrus
nTPM: 112.6
2530 Female, age 94, left hemisphere 156.5
2010 Male, age 76, both hemispheres 121.5
2246 Female, age 85, both hemispheres 114.5
2531 Female, age 67, both hemispheres 108.1
2528 Male, age 74, both hemispheres 91.6
1927 Female, age 91, both hemispheres 83.3
Entorhinal gyrus
nTPM: 108.6
2686 Male, age 75, right hemisphere 130.9
1787 Male, age 76, left hemisphere 115.0
2117 Female, age 91, right hemisphere 111.2
2764 Male, age 80, right hemisphere 105.4
1938 Female, age 85, left hemisphere 104.9
2613 Female, age 94, left hemisphere 84.4
Hippocampus, CA1
nTPM: 105.4
2045 Male, age 76, both hemispheres 116.7
2082 Female, age 91, right hemisphere 106.2
2527 Male, age 74, both hemispheres 105.4
1873 Female, age 85, both hemispheres 100.2
2749 Male, age 80, left hemisphere 98.4
Hippocampus, CA2
nTPM: 110.6
2437 Female, age 94, left hemisphere 126.3
1892 Male, age 76, both hemispheres 114.4
1963 Male, age 80, left hemisphere 114.2
1940 Female, age 85, left hemisphere 105.5
2113 Female, age 91, right hemisphere 104.5
2249 Male, age 74, both hemispheres 98.9
Hippocampus, CA3
nTPM: 96.6
1867 Male, age 76, both hemispheres 118.8
1891 Female, age 85, both hemispheres 106.5
2861 Female, age 67, both hemispheres 96.4
2137 Male, age 80, left hemisphere 95.5
2436 Male, age 74, both hemispheres 93.8
2620 Female, age 94, left hemisphere 68.8
Parahippocampal cortex
nTPM: 103.4
2018 Male, age 76, both hemispheres 136.3
1850 Male, age 80, both hemispheres 121.4
2532 Female, age 72, left hemisphere 109.4
2692 Male, age 74, both hemispheres 106.0
2245 Female, age 91, both hemispheres 105.0
2250 Female, age 67, right hemisphere 101.4
1990 Female, age 91, right hemisphere 94.8
1933 Female, age 85, both hemispheres 91.4
2693 Female, age 94, both hemispheres 84.5
2622 Female, age 67, right hemisphere 84.3
Perirhinal gyrus
nTPM: 110.1
2848 Male, age 76, right hemisphere 116.7
1841 Female, age 85, right hemisphere 111.9
1847 Female, age 91, left hemisphere 111.4
1794 Male, age 80, right hemisphere 110.8
2521 Female, age 94, right hemisphere 99.6
Subiculum
nTPM: 116.6
2438 Female, age 94, left hemisphere 176.1
1977 Female, age 85, both hemispheres 114.7
2042 Male, age 76, both hemispheres 108.7
2619 Male, age 74, both hemispheres 103.4
1901 Male, age 80, both hemispheres 102.3
2729 Female, age 91, right hemisphere 94.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 438.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 438.7
Samples: 255

Max nTPM: 1232.9
Min nTPM: 220.1
Std nTPM: 144.3
Median nTPM: 409.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1232.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1089.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 970.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 931.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 876.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 842.4
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 772.0
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 757.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 756.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 754.9
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 742.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 46.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.4
FF:10169-103B7 60 years, female 59.1
FF:10153-102I9 76 years, female 33.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 328.5
Pig sample Sample description nTPM
Subiculum
nTPM: 289.6
Samples: 4

Max nTPM: 361.8
Min nTPM: 255.6
Sample A Female 361.8
Sample B Female 283.2
Sample C Male 257.9
Sample D Male 255.6
Dorsal hippocampus
nTPM: 328.5
Samples: 4

Max nTPM: 409.2
Min nTPM: 258.5
Sample A Female 409.2
Sample B Female 296.4
Sample C Male 349.9
Sample D Male 258.5
Entorhinal cortex
nTPM: 252.6
Samples: 4

Max nTPM: 294.3
Min nTPM: 209.6
Sample A Female 243.5
Sample B Female 294.3
Sample C Male 262.8
Sample D Male 209.6
Ventral hippocampus
nTPM: 285.4
Samples: 4

Max nTPM: 324.8
Min nTPM: 250.1
Sample A Female 282.7
Sample B Female 250.1
Sample C Male 324.8
Sample D Male 284.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 716.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 681.7
Samples: 4

Max nTPM: 744.3
Min nTPM: 637.1
Sample A Male 694.7
Sample B Male 637.1
Sample C Female 744.3
Sample D Female 650.8
Hippocampal formation
nTPM: 716.7
Samples: 4

Max nTPM: 803.9
Min nTPM: 669.8
Sample A Male 803.9
Sample B Male 680.7
Sample C Female 669.8
Sample D Female 712.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
69873295 Antisense, RP_050510_04_H12, Mouse strain C57BL/6J (56 days, male) 11.0

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