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  • RPS4X
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:449.5 nTPM
HPA Brain:187.4 nTPM
GTEx:449.5 nTPM
Pig:353.3 nTPM
Mouse:813.7 nTPM
Allen mouse:8.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

187.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 143.1
1961 Female, age 42, unknown 161.2
2226 Male, age 75, left hemisphere 125.0
Dorsomedial nucleus
nTPM: 127.5
2017 Female, age 42, unknown 143.0
1989 Male, age 62, unknown 120.1
2041 Female, age 72, unknown 119.3
Lateral hypothalamic area
nTPM: 165.5
2228 Male, age 66, unknown 216.3
2412 Male, age 62, unknown 172.2
1791 Male, age 80, right hemisphere 146.5
2271 Male, age 75, both hemispheres 127.1
Mammillary body
nTPM: 134.1
1948 Female, age 72, unknown 144.5
1945 Male, age 80, right hemisphere 141.2
1834 Female, age 42, unknown 139.4
2413 Male, age 66, unknown 122.8
1923 Female, age 72, unknown 122.3
Paraventricular nucleus
nTPM: 172.1
2700 Male, age 62, unknown 172.1
Preoptic area
nTPM: 135.3
1861 Female, age 42, unknown 154.1
2414 Female, age 72, unknown 127.5
1907 Male, age 80, right hemisphere 124.3
Supraoptic nucleus
nTPM: 187.4
2835 Female, age 72, unknown 209.8
2043 Male, age 62, unknown 180.7
1894 Female, age 72, unknown 171.8
Ventromedial nucleus
nTPM: 162.9
1982 Female, age 72, unknown 168.7
1822 Female, age 42, unknown 157.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

449.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 449.5
Samples: 257

Max nTPM: 1302.7
Min nTPM: 212.8
Std nTPM: 153.1
Median nTPM: 419.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1302.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1087.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1035.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1031.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1005.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 967.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 951.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 936.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 873.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 813.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 799.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 742.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 711.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 709.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 689.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 685.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 684.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 668.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 651.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 649.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 648.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 627.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 626.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 620.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 598.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 591.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 585.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 583.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 578.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 577.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 576.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 573.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 573.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 569.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 563.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 561.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 560.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 559.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 555.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 553.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 548.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 546.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 544.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 543.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 543.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 541.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 540.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 536.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 531.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 527.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 525.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 524.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 522.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 520.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 520.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 519.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 517.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 512.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 512.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 511.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 509.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 509.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 508.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 506.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 503.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 503.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 501.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 496.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 495.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 494.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 492.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 491.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 491.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 491.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 490.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 490.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 487.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 487.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 485.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 477.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 477.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 476.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 476.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 474.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 474.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 472.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 472.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 470.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 468.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 467.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 467.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 466.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 465.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 464.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 462.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 461.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 461.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 459.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 454.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 452.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 451.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 448.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 448.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 445.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 445.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 445.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 444.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 444.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 443.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 442.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 440.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 439.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 438.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 435.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 434.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 433.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 431.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 431.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 430.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 430.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 429.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 429.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 428.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 426.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 424.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 423.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 423.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 421.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 419.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 419.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 415.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 414.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 412.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 411.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 411.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 411.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 410.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 407.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 406.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 405.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 404.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 403.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 400.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 400.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 397.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 397.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 393.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 393.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 392.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 391.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 390.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 390.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 389.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 389.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 385.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 385.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 383.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 383.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 382.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 382.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 380.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 380.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 379.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 379.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 378.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 377.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 376.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 376.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 375.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 373.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 372.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 372.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 371.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 371.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 370.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 367.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 366.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 364.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 363.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 363.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 362.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 362.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 362.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 361.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 361.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 360.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 360.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 358.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 357.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 357.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 357.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 356.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 356.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 356.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 355.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 354.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 350.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 349.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 349.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 348.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 347.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 346.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 345.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 343.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 342.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 341.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 341.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 339.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 338.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 338.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 338.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 337.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 333.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 333.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 332.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 331.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 330.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 328.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 328.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 323.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 321.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 319.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 319.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 319.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 318.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 313.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 313.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 311.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 310.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 310.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 310.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 308.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 303.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 299.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 296.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 296.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 293.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 292.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 290.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 289.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 288.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 285.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 282.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 281.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 279.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 279.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 272.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 271.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 267.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 267.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 265.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 264.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 261.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 257.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 235.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 231.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 212.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

353.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 353.3
Samples: 4

Max nTPM: 435.7
Min nTPM: 269.8
Sample A Female 435.7
Sample B Female 355.0
Sample C Male 352.6
Sample D Male 269.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

813.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 813.7
Samples: 4

Max nTPM: 886.5
Min nTPM: 767.6
Sample A Male 767.6
Sample B Male 886.5
Sample C Female 827.6
Sample D Female 773.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.2
69873295 Antisense, RP_050510_04_H12, Mouse strain C57BL/6J (56 days, male) 8.2

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