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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • RPS4X
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:124.3 nTPM
GTEx:414.2 nTPM
FANTOM5:54.5 Scaled Tags Per Million
Macaque:151.0 nTPM
Pig:286.3 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.3
Sample id Sample description nTPM
Putamen
nTPM: 124.3
2482 Female, age 94, left hemisphere 142.2
1838 Male, age 80, right hemisphere 134.3
2466 Female, age 79, unknown 126.2
1937 Female, age 91, right hemisphere 120.0
2647 Male, age 75, left hemisphere 117.7
2489 Female, age 72, unknown 115.6
1829 Male, age 74, unknown 114.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

414.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 414.2
Samples: 254

Max nTPM: 951.6
Min nTPM: 222.4
Std nTPM: 110.0
Median nTPM: 393.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 951.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 836.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 747.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 742.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 693.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 687.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 679.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 674.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 665.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 646.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 638.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 638.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 627.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 615.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 611.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 609.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 595.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 589.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 580.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 576.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 575.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 574.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 572.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 570.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 564.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 562.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 544.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 543.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 542.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 540.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 537.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 534.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 532.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 527.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 524.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 522.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 521.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 520.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 518.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 515.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 514.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 514.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 512.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 512.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 511.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 502.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 500.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 499.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 498.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 494.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 493.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 491.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 490.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 487.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 483.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 480.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 478.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 478.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 475.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 475.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 473.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 472.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 469.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 469.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 468.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 465.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 464.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 463.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 463.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 461.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 457.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 455.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 455.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 454.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 454.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 453.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 452.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 452.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 450.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 449.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 444.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 443.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 443.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 442.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 441.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 440.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 439.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 439.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 436.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 435.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 435.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 432.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 432.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 431.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 431.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 427.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 425.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 425.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 424.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 423.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 418.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 416.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 415.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 415.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 415.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 414.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 413.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 413.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 411.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 410.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 410.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 409.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 409.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 407.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 407.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 407.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 406.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 406.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 405.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 401.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 401.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 397.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 397.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 396.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 394.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 393.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 393.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 393.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 391.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 389.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 389.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 388.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 388.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 388.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 385.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 385.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 384.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 384.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 383.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 383.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 383.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 382.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 381.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 381.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 380.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 376.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 376.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 376.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 375.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 375.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 374.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 374.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 372.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 370.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 370.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 370.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 370.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 367.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 366.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 366.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 366.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 365.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 365.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 365.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 359.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 359.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 358.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 357.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 355.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 355.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 353.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 353.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 352.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 351.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 351.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 350.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 349.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 348.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 347.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 347.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 346.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 345.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 344.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 342.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 342.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 342.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 339.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 338.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 338.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 338.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 335.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 335.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 335.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 334.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 334.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 333.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 333.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 331.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 330.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 329.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 326.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 326.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 326.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 326.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 325.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 325.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 324.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 323.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 323.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 318.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 317.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 317.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 317.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 316.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 313.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 313.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 312.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 310.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 309.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 305.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 305.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 303.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 301.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 299.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 299.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 298.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 298.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 297.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 296.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 294.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 292.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 291.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 288.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 282.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 277.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 276.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 276.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 275.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 275.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 274.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 272.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 270.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 269.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 269.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 267.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 265.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 264.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 253.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 253.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 250.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 249.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 243.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 228.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 222.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

54.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 54.5
FF:10176-103C5 60 years, female 54.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.0
Macaque sample Sample description nTPM
Putamen
nTPM: 151.0
Samples: 2

Max nTPM: 171.8
Min nTPM: 130.2
Sample A 130.2
Sample B 171.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.3
Pig sample Sample description nTPM
Putamen
nTPM: 286.3
Samples: 3

Max nTPM: 333.3
Min nTPM: 229.4
Sample B Female 229.4
Sample C Male 333.3
Sample D Male 296.1

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