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  • TISSUE

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  • UBL5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:508.9 nTPM
HPA Brain:210.7 nTPM
GTEx:508.9 nTPM
Pig:429.5 nTPM
Mouse:533.4 nTPM
Allen mouse:4.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 204.7
2226 Male, age 75, left hemisphere 262.4
1961 Female, age 42, unknown 147.0
Dorsomedial nucleus
nTPM: 153.2
2041 Female, age 72, unknown 185.5
1989 Male, age 62, unknown 151.3
2017 Female, age 42, unknown 122.9
Lateral hypothalamic area
nTPM: 194.8
1791 Male, age 80, right hemisphere 240.4
2271 Male, age 75, both hemispheres 215.1
2228 Male, age 66, unknown 210.8
2412 Male, age 62, unknown 112.6
Mammillary body
nTPM: 189.6
1923 Female, age 72, unknown 288.7
2413 Male, age 66, unknown 183.2
1948 Female, age 72, unknown 171.4
1945 Male, age 80, right hemisphere 167.1
1834 Female, age 42, unknown 137.4
Paraventricular nucleus
nTPM: 109.0
2700 Male, age 62, unknown 109.0
Preoptic area
nTPM: 142.8
1907 Male, age 80, right hemisphere 179.5
1861 Female, age 42, unknown 136.3
2414 Female, age 72, unknown 112.7
Supraoptic nucleus
nTPM: 210.7
1894 Female, age 72, unknown 293.3
2043 Male, age 62, unknown 196.5
2835 Female, age 72, unknown 142.3
Ventromedial nucleus
nTPM: 160.1
1982 Female, age 72, unknown 183.5
1822 Female, age 42, unknown 136.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

508.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 508.9
Samples: 257

Max nTPM: 1429.3
Min nTPM: 210.9
Std nTPM: 131.9
Median nTPM: 498.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1429.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1112.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1088.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1053.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 935.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 835.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 815.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 810.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 740.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 736.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 734.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 725.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 719.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 714.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 691.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 684.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 683.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 667.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 660.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 654.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 654.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 649.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 643.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 637.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 628.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 628.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 626.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 625.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 622.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 622.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 612.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 611.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 610.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 610.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 609.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 602.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 601.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 600.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 598.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 597.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 595.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 595.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 590.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 590.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 589.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 587.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 585.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 583.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 581.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 581.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 577.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 575.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 570.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 569.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 569.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 568.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 567.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 566.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 563.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 562.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 557.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 557.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 554.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 553.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 553.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 551.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 550.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 549.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 547.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 547.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 546.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 545.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 545.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 543.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 543.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 543.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 543.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 540.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 540.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 539.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 538.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 538.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 537.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 536.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 535.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 534.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 533.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 532.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 531.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 528.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 526.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 525.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 524.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 523.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 523.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 522.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 519.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 519.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 517.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 517.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 517.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 514.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 513.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 513.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 513.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 510.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 510.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 510.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 510.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 509.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 509.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 507.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 507.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 505.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 505.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 504.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 504.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 503.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 502.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 502.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 502.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 501.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 501.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 501.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 500.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 500.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 500.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 499.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 498.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 497.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 495.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 494.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 492.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 489.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 488.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 488.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 488.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 488.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 487.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 485.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 484.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 484.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 481.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 481.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 478.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 478.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 478.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 478.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 477.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 476.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 475.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 472.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 472.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 471.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 471.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 470.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 469.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 468.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 468.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 467.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 465.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 465.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 465.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 459.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 455.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 453.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 452.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 450.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 449.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 449.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 449.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 448.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 448.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 447.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 446.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 446.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 445.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 445.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 445.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 444.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 443.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 441.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 440.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 440.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 439.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 439.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 438.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 437.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 437.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 436.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 435.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 435.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 434.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 433.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 433.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 430.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 429.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 428.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 427.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 426.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 425.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 425.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 425.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 424.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 422.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 422.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 422.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 421.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 420.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 418.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 415.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 414.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 411.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 409.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 406.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 406.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 405.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 404.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 404.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 404.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 403.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 402.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 401.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 401.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 398.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 398.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 394.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 391.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 382.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 380.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 380.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 378.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 377.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 377.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 376.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 375.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 369.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 366.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 364.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 364.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 358.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 357.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 356.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 352.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 349.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 348.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 347.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 337.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 335.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 333.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 332.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 332.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 310.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 307.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 297.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 215.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 210.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

429.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 429.6
Samples: 4

Max nTPM: 554.4
Min nTPM: 334.8
Sample A Female 554.4
Sample B Female 431.1
Sample C Male 397.9
Sample D Male 334.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

533.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 533.4
Samples: 4

Max nTPM: 571.7
Min nTPM: 489.4
Sample A Male 489.4
Sample B Male 571.7
Sample C Female 548.5
Sample D Female 524.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.5
68744600 Antisense, RP_050208_01_C02, Mouse strain C57BL/6J (56 days, male) 4.5

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