HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:685.1 nTPM
HPA Brain:1467.9 nTPM
GTEx:685.1 nTPM
FANTOM5:2608.5 Scaled Tags Per Million
Mouse:1505.0 nTPM
Allen mouse:15.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044999Antibody CAB018558
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1467.9
Sample id Sample description nTPM
Hippocampus
nTPM: 1175.6
1898 Male, age 80, left hemisphere 1384.8
1911 Female, age 85, right hemisphere 1247.6
2621 Female, age 67, right hemisphere 1229.9
2148 Female, age 91, left hemisphere 1177.7
1855 Male, age 76, left hemisphere 1101.9
2529 Female, age 94, left hemisphere 911.9
Dentate gyrus
nTPM: 1241.5
1927 Female, age 91, both hemispheres 2011.5
2010 Male, age 76, both hemispheres 1169.3
2246 Female, age 85, both hemispheres 1153.0
2531 Female, age 67, both hemispheres 1069.1
2530 Female, age 94, left hemisphere 1037.8
2528 Male, age 74, both hemispheres 1008.3
Entorhinal gyrus
nTPM: 991.9
1938 Female, age 85, left hemisphere 1256.2
2613 Female, age 94, left hemisphere 1121.0
1787 Male, age 76, left hemisphere 1053.1
2764 Male, age 80, right hemisphere 940.3
2686 Male, age 75, right hemisphere 840.6
2117 Female, age 91, right hemisphere 740.4
Hippocampus, CA1
nTPM: 1467.9
2749 Male, age 80, left hemisphere 2523.8
2045 Male, age 76, both hemispheres 1408.6
1873 Female, age 85, both hemispheres 1310.9
2527 Male, age 74, both hemispheres 1230.6
2082 Female, age 91, right hemisphere 865.6
Hippocampus, CA2
nTPM: 1134.8
1963 Male, age 80, left hemisphere 1643.5
1892 Male, age 76, both hemispheres 1437.4
2249 Male, age 74, both hemispheres 1038.4
2113 Female, age 91, right hemisphere 929.8
1940 Female, age 85, left hemisphere 901.1
2437 Female, age 94, left hemisphere 858.7
Hippocampus, CA3
nTPM: 1332.6
2137 Male, age 80, left hemisphere 2379.4
2620 Female, age 94, left hemisphere 1272.5
1867 Male, age 76, both hemispheres 1195.2
2436 Male, age 74, both hemispheres 1108.1
2861 Female, age 67, both hemispheres 1041.9
1891 Female, age 85, both hemispheres 998.6
Parahippocampal cortex
nTPM: 1094.1
2245 Female, age 91, both hemispheres 1502.2
1850 Male, age 80, both hemispheres 1432.9
1933 Female, age 85, both hemispheres 1184.9
2250 Female, age 67, right hemisphere 1108.3
1990 Female, age 91, right hemisphere 1107.0
2693 Female, age 94, both hemispheres 1064.7
2532 Female, age 72, left hemisphere 1008.6
2018 Male, age 76, both hemispheres 892.6
2692 Male, age 74, both hemispheres 826.7
2622 Female, age 67, right hemisphere 813.4
Perirhinal gyrus
nTPM: 1366.2
1847 Female, age 91, left hemisphere 1743.9
1841 Female, age 85, right hemisphere 1387.5
1794 Male, age 80, right hemisphere 1362.5
2521 Female, age 94, right hemisphere 1216.6
2848 Male, age 76, right hemisphere 1120.3
Subiculum
nTPM: 954.0
1901 Male, age 80, both hemispheres 1330.3
2042 Male, age 76, both hemispheres 1001.3
1977 Female, age 85, both hemispheres 907.7
2438 Female, age 94, left hemisphere 880.6
2729 Female, age 91, right hemisphere 842.2
2619 Male, age 74, both hemispheres 762.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 685.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 685.1
Samples: 255

Max nTPM: 1521.6
Min nTPM: 212.9
Std nTPM: 302.4
Median nTPM: 627.4
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 1521.6
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 1475.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1443.7
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 1434.8
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 1395.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 1377.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1362.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1352.7
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1345.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 1342.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1313.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 2608.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2608.5
FF:10169-103B7 60 years, female 3446.0
FF:10153-102I9 76 years, female 1770.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1505.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1505.0
Samples: 4

Max nTPM: 1588.3
Min nTPM: 1463.1
Sample A Male 1501.3
Sample B Male 1588.3
Sample C Female 1463.1
Sample D Female 1467.2
Hippocampal formation
nTPM: 1374.8
Samples: 4

Max nTPM: 1575.5
Min nTPM: 1227.7
Sample A Male 1575.5
Sample B Male 1336.1
Sample C Female 1359.7
Sample D Female 1227.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
179 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 15.9
180 Antisense, RP_Baylor_102652, Mouse strain C57BL/6J (56 days, male) 14.3

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