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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2790.4
nTPM
Monaco:
14793.3
nTPM
Schmiedel:
19787.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2790.4
HPA sample
nTPM
gdT-cell nTPM: 1836.8
Samples: 6
Max nTPM: 5432.2
Min nTPM: 804.9
P10809_1007
5432.2
P10809_1022
1133.4
P10809_1041
1503.4
P10809_1060
804.9
P10809_1077
1030.4
P10809_1098
1116.6
MAIT T-cell nTPM: 2358.9
Samples: 6
Max nTPM: 5543.1
Min nTPM: 1207.3
P10809_1006
5543.1
P10809_1024
1949.6
P10809_1043
1207.3
P10809_1062
1704.9
P10809_1083
2034.9
P10809_1097
1713.5
Memory CD4 T-cell nTPM: 2130.7
Samples: 6
Max nTPM: 5417.5
Min nTPM: 1178.8
P10809_1014
5417.5
P10809_1026
2234.8
P10809_1045
1310.9
P10809_1064
1365.0
P10809_1086
1277.0
P10809_1113
1178.8
Memory CD8 T-cell nTPM: 2375.2
Samples: 5
Max nTPM: 5566.5
Min nTPM: 1020.2
P10809_1012
5566.5
P10809_1027
2310.6
P10809_1046
1343.7
P10809_1065
1635.0
P10809_1111
1020.2
Naive CD4 T-cell nTPM: 2247.7
Samples: 6
Max nTPM: 6079.0
Min nTPM: 1050.9
P10809_1015
6079.0
P10809_1030
2353.1
P10809_1049
1081.9
P10809_1068
1488.2
P10809_1085
1433.1
P10809_1112
1050.9
Naive CD8 T-cell nTPM: 2790.4
Samples: 6
Max nTPM: 8265.6
Min nTPM: 1063.6
P10809_1016
8265.6
P10809_1031
2487.0
P10809_1050
1626.4
P10809_1069
1690.9
P10809_1087
1063.6
P10809_1110
1608.9
T-reg nTPM: 1514.6
Samples: 6
Max nTPM: 3697.3
Min nTPM: 940.3
P10809_1018
3697.3
P10809_1037
1166.9
P10809_1056
1095.8
P10809_1075
1163.5
P10809_1094
1023.6
P10809_1106
940.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14793.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9399.0
Samples: 4
Max nTPM: 12833.0
Min nTPM: 5296.9
RHH5202_R3573
11467.5
RHH5230_R3602
7998.6
RHH5259_R3631
5296.9
RHH5288_R3660
12833.0
Effector memory CD8 T-cell nTPM: 10164.1
Samples: 4
Max nTPM: 16473.3
Min nTPM: 7342.5
RHH5203_R3574
9054.2
RHH5231_R3603
16473.3
RHH5260_R3632
7342.5
RHH5289_R3661
7786.4
MAIT T-cell nTPM: 13921.3
Samples: 4
Max nTPM: 20079.7
Min nTPM: 6106.9
RHH5233_R3605
20079.7
RHH5205_R3576
6106.9
RHH5262_R3634
13237.6
RHH5297_R3663
16261.0
Memory CD4 T-cell TFH nTPM: 14793.3
Samples: 4
Max nTPM: 25522.2
Min nTPM: 9308.8
RHH5300_R3666
10894.7
RHH5236_R3608
25522.2
RHH5265_R3637
9308.8
RHH5208_R3579
13447.5
Memory CD4 T-cell Th1 nTPM: 10212.4
Samples: 4
Max nTPM: 13986.6
Min nTPM: 7287.3
RHH5210_R3581
12122.8
RHH5302_R3668
13986.6
RHH5238_R3610
7452.7
RHH5267_R3639
7287.3
Memory CD4 T-cell Th1/Th17 nTPM: 11481.8
Samples: 4
Max nTPM: 17703.1
Min nTPM: 6350.0
RHH5303_R3669
17703.1
RHH5211_R3582
13536.8
RHH5239_R3611
6350.0
RHH5268_R3640
8337.1
Memory CD4 T-cell Th17 nTPM: 8812.1
Samples: 4
Max nTPM: 13011.0
Min nTPM: 5963.3
RHH5304_R3670
7822.0
RHH5212_R3583
13011.0
RHH5240_R3612
8452.2
RHH5269_R3641
5963.3
Memory CD4 T-cell Th2 nTPM: 12195.0
Samples: 4
Max nTPM: 17902.6
Min nTPM: 8532.0
RHH5305_R3671
9991.0
RHH5213_R3584
12354.4
RHH5241_R3613
17902.6
RHH5270_R3642
8532.0
Naive CD4 T-cell nTPM: 12034.2
Samples: 4
Max nTPM: 17087.8
Min nTPM: 7388.5
RHH5306_R3672
11124.3
RHH5214_R3585
17087.8
RHH5242_R3614
12536.0
RHH5271_R3643
7388.5
Naive CD8 T-cell nTPM: 12578.5
Samples: 4
Max nTPM: 14516.7
Min nTPM: 9103.2
RHH5201_R3572
14516.7
RHH5229_R3601
9103.2
RHH5258_R3630
13579.8
RHH5287_R3659
13114.2
Non-Vd2 gdTCR nTPM: 11411.5
Samples: 4
Max nTPM: 16528.0
Min nTPM: 6913.8
RHH5235_R3607
6913.8
RHH5264_R3636
16528.0
RHH5207_R3578
9065.3
RHH5299_R3665
13138.7
T-reg nTPM: 12517.3
Samples: 4
Max nTPM: 21658.8
Min nTPM: 6734.2
RHH5301_R3667
11509.8
RHH5237_R3609
21658.8
RHH5266_R3638
6734.2
RHH5209_R3580
10166.2
Terminal effector memory CD4 T-cell nTPM: 12196.6
Samples: 2
Max nTPM: 17197.0
Min nTPM: 7196.2
RHH5243_R3615
7196.2
RHH5272_R3644
17197.0
Terminal effector memory CD8 T-cell nTPM: 12724.9
Samples: 4
Max nTPM: 18265.8
Min nTPM: 8574.5
RHH5232_R3604
18265.8
RHH5204_R3575
12113.2
RHH5261_R3633
8574.5
RHH5296_R3662
11946.0
Vd2 gdTCR nTPM: 13740.3
Samples: 4
Max nTPM: 16442.2
Min nTPM: 9697.1
RHH5234_R3606
15040.2
RHH5206_R3577
13781.6
RHH5263_R3635
9697.1
RHH5298_R3664
16442.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.