We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL10A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL10A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:602.2 nTPM
HPA Brain:369.2 nTPM
GTEx:602.2 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:510.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

369.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 272.1
2565 Male, age 75, midline 351.4
1981 Female, age 72, midline 324.4
2194 Female, age 79, both hemispheres 233.9
2048 Male, age 55, midline 230.7
2816 Male, age 47, midline 220.4
Cervical spinal cord, dorsal horn
nTPM: 286.0
2173 Female, age 72, unknown 366.4
2069 Male, age 47, both hemispheres 364.7
2296 Male, age 66, both hemispheres 305.4
1877 Male, age 55, unknown 272.5
2297 Male, age 75, both hemispheres 204.6
2721 Male, age 90, both hemispheres 202.6
Cervical spinal cord, ventral horn
nTPM: 369.2
2480 Male, age 75, both hemispheres 544.2
2809 Male, age 90, both hemispheres 462.3
2098 Female, age 72, unknown 411.1
2295 Male, age 66, both hemispheres 341.9
2068 Male, age 55, unknown 279.6
2820 Female, age 79, both hemispheres 176.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

602.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 602.2
Samples: 204

Max nTPM: 1499.9
Min nTPM: 313.5
Std nTPM: 170.2
Median nTPM: 576.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 1499.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1055.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1011.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1006.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 990.5
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 987.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 973.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 939.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 938.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 896.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 893.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 880.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 877.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 867.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 856.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 856.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 855.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 851.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 849.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 848.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 845.0
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 816.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 815.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 813.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 812.1
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 798.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 796.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 794.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 793.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 788.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 778.9
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 775.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 770.9
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 770.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 767.9
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 765.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 762.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 761.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 760.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 742.3
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 738.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 735.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 731.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 729.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 728.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 717.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 714.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 710.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 703.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 702.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 699.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 695.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 692.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 692.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 688.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 681.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 680.4
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 676.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 676.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 674.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 673.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 672.7
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 670.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 669.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 665.2
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 660.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 649.7
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 644.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 644.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 642.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 639.9
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 639.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 633.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 632.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 630.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 629.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 626.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 620.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 620.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 620.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 617.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 615.8
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 614.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 614.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 611.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 611.7
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 608.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 608.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 603.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 598.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 597.7
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 594.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 594.5
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 594.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 590.1
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 589.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 587.3
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 585.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 585.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 583.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 580.1
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 577.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 575.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 573.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 570.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 570.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 569.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 569.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 568.5
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 566.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 566.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 559.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 557.9
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 557.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 555.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 550.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 545.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 538.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 537.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 537.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 534.6
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 532.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 531.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 531.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 530.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 529.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 527.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 523.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 521.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 521.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 520.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 517.3
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 511.0
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 509.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 508.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 506.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 504.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 503.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 503.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 501.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 498.4
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 494.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 494.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 489.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 488.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 487.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 486.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 486.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 484.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 484.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 483.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 481.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 479.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 476.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 476.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 475.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 473.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 473.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 471.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 465.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 463.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 462.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 462.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 461.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 460.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 458.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 457.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 449.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 448.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 446.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 443.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 442.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 442.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 435.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 432.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 428.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 428.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 417.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 413.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 413.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 412.0
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 409.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 408.0
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 406.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 403.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 399.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 399.6
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 398.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 395.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 394.8
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 392.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 392.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 387.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 382.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 374.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 372.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 368.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 368.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 361.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 359.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 351.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 341.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 314.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 313.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 15.8
FF:10159-103A6 76 years, female 17.4
FF:10181-103D1 60 years, female 14.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

510.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 510.4
Samples: 4

Max nTPM: 787.2
Min nTPM: 346.8
Sample A Female 402.4
Sample B Female 505.2
Sample C Male 787.2
Sample D Male 346.8
Ventral spinal cord
nTPM: 441.3
Samples: 4

Max nTPM: 510.9
Min nTPM: 368.1
Sample A Female 368.1
Sample B Female 487.9
Sample C Male 510.9
Sample D Male 398.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo