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  • TISSUE

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  • MT-ND2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:59027.6 nTPM
HPA Brain:38240.4 nTPM
GTEx:59027.6 nTPM
Pig:6928.5 nTPM
Mouse:7535.9 nTPM
Allen mouse:8.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38240.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 9550.7
2226 Male, age 75, left hemisphere 9962.1
1961 Female, age 42, unknown 9139.4
Dorsomedial nucleus
nTPM: 12950.2
1989 Male, age 62, unknown 17835.5
2017 Female, age 42, unknown 13645.0
2041 Female, age 72, unknown 7370.0
Lateral hypothalamic area
nTPM: 15509.4
2412 Male, age 62, unknown 42014.7
2271 Male, age 75, both hemispheres 9731.1
1791 Male, age 80, right hemisphere 6017.6
2228 Male, age 66, unknown 4274.2
Mammillary body
nTPM: 20535.9
2413 Male, age 66, unknown 28311.0
1948 Female, age 72, unknown 26858.5
1834 Female, age 42, unknown 23436.2
1945 Male, age 80, right hemisphere 15901.6
1923 Female, age 72, unknown 8172.0
Paraventricular nucleus
nTPM: 38240.4
2700 Male, age 62, unknown 38240.4
Preoptic area
nTPM: 19047.7
1861 Female, age 42, unknown 26391.5
2414 Female, age 72, unknown 23433.0
1907 Male, age 80, right hemisphere 7318.6
Supraoptic nucleus
nTPM: 17973.2
2835 Female, age 72, unknown 42383.6
2043 Male, age 62, unknown 7060.2
1894 Female, age 72, unknown 4475.9
Ventromedial nucleus
nTPM: 9922.5
1822 Female, age 42, unknown 11068.4
1982 Female, age 72, unknown 8776.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59027.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 59027.6
Samples: 257

Max nTPM: 326150.4
Min nTPM: 7709.3
Std nTPM: 48888.0
Median nTPM: 43589.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 326150.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 310201.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 237162.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 217718.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 209473.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 208812.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 202410.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 195261.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 187469.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 179820.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 178846.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 176732.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 163282.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 155938.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 151185.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 145624.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 145002.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 141759.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 139396.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 139265.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 138732.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 134352.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 132849.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 130803.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 127084.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 123216.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 121335.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 116862.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 116801.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 116057.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 109396.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 107296.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 104679.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 104494.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 104053.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 102127.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 100895.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100147.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 98397.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 97880.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 97426.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 86665.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 86286.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 85326.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 84636.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84106.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 83712.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 82912.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 82804.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 82714.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 82509.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 81963.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 80955.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 78029.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 77892.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 77608.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 77440.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 77089.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 76251.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 76127.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 75738.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 73733.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 73138.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72530.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 71703.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 70641.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 69356.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 68901.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 68738.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 68276.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 67403.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 65726.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 65615.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 64979.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 64677.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 64122.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 63804.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 63365.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 61851.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 61600.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 61428.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 60996.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 60537.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 60523.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 59286.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 59090.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 58443.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 58127.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 56876.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 56316.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 56145.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 55972.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 55187.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54934.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 54754.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 53606.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 53085.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 52694.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 52677.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 52394.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 52342.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 52047.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 51763.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50797.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 50637.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 50553.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 50134.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 49618.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 49177.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 49070.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 49057.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 48803.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 48167.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 47821.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 47685.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47508.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 47095.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 46659.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 46191.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 45951.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 45637.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 45493.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 45430.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 44754.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 44628.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 44510.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 44295.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 44231.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 43589.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 43567.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 43193.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 41945.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 41753.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 41741.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 41727.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 41512.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 40894.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 40695.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 40188.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 39330.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 39151.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 39096.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 38285.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 38211.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 37927.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 37836.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 37694.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 37685.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37308.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 37156.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 37140.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 37047.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 36583.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 36291.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 36237.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 35596.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 35534.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 35276.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 34759.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 34730.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 34712.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 34528.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 34452.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33748.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 33348.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 33257.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 33157.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 32892.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 32409.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 32269.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 32075.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 32035.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 31877.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 31750.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 31634.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 31603.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 31482.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 31245.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 31243.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30910.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 30719.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 30354.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 29707.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 29643.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 29129.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 28866.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 28695.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 28522.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28522.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 28488.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 28484.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 28307.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 28284.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 28180.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 27963.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 27883.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 27827.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 27604.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 27386.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 27351.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 27329.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 26953.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 26915.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 26340.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 26272.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 26117.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 26090.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 25392.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 24804.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 24489.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 24247.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24222.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 24020.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 23999.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 23693.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 23686.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 23543.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 23078.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 23031.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22909.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 22808.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 22686.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 22576.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 22121.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 22101.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 22068.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 21542.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 21357.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20930.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 20627.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 20497.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 19946.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 19941.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 19892.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 19597.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 19577.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 18637.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18384.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 18271.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 18137.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 17871.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 17524.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 15812.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 15575.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15462.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 15104.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14828.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 14736.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 14560.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 14003.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 13005.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 11707.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 11610.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 10677.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 9848.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 8486.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 7709.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6928.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6928.5
Samples: 4

Max nTPM: 9214.0
Min nTPM: 3374.8
Sample A Female 9214.0
Sample B Female 7645.9
Sample C Male 7479.1
Sample D Male 3374.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7535.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 7535.9
Samples: 4

Max nTPM: 8255.2
Min nTPM: 6456.7
Sample A Male 6456.7
Sample B Male 8255.2
Sample C Female 7627.4
Sample D Female 7804.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.3
75042238 Antisense, RP_051219_02_B02, Mouse strain C57BL/6J (56 days, male) 8.3
73949707 Antisense, RP_051219_02_B02, Mouse strain C57BL/6J (56 days, male) 5.1

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