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MT-ND2
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • MT-ND2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:55567.6 nTPM
HPA Brain:19853.2 nTPM
GTEx:55567.6 nTPM
Pig:6873.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19853.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 12798.8
2565 Male, age 75, midline 18809.5
2194 Female, age 79, both hemispheres 17184.9
2816 Male, age 47, midline 11797.4
2048 Male, age 55, midline 11669.2
1981 Female, age 72, midline 4533.3
Cervical spinal cord, dorsal horn
nTPM: 9216.7
2297 Male, age 75, both hemispheres 18243.7
2721 Male, age 90, both hemispheres 16281.5
1877 Male, age 55, unknown 9050.5
2069 Male, age 47, both hemispheres 4534.6
2173 Female, age 72, unknown 4088.3
2296 Male, age 66, both hemispheres 3102.0
Cervical spinal cord, ventral horn
nTPM: 19853.2
2480 Male, age 75, both hemispheres 40244.7
2820 Female, age 79, both hemispheres 30725.3
2295 Male, age 66, both hemispheres 17875.7
2068 Male, age 55, unknown 15291.4
2809 Male, age 90, both hemispheres 13275.0
2098 Female, age 72, unknown 1707.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55567.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 55567.6
Samples: 204

Max nTPM: 348001.0
Min nTPM: 9311.1
Std nTPM: 51881.5
Median nTPM: 41867.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 348001.0
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 318001.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 280733.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 268336.4
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 234946.8
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 200554.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 189096.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 184982.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 165064.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 156461.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 154328.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 146687.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 144294.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 130668.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 129982.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 125204.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 120441.8
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 117256.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 113338.3
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 109846.8
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 108395.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 107103.5
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 104884.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 103695.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 99473.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 97936.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 97031.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 88274.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 87790.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 86483.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 84162.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 83979.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 82770.5
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 82736.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 80386.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 76754.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 75916.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 75659.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 75656.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 74249.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 73774.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 73422.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 72222.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 72051.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 70566.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 69980.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 68020.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 66737.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 66607.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 66594.7
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 66303.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 66121.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 65617.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 65300.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 64839.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 63276.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 63003.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 61844.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 59296.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 59064.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 57860.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 57465.0
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 57453.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 57306.3
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 56273.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 56096.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 55163.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 54515.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 52912.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 52301.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 52055.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 51901.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 51850.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 51771.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 51199.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 50967.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 50905.2
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 50573.3
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 49424.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 48323.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 47472.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 47102.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 46797.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 46680.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 46677.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 46569.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 45749.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 45667.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 45155.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 44920.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 44905.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 44840.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 44691.3
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 44559.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 43765.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 43738.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 43428.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 42979.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 42281.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 42167.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 42151.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 42008.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 41725.7
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 41564.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 41152.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 40561.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 40465.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 39007.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 38441.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 37832.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 37433.6
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 37224.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 35173.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 35164.7
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 34982.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 34488.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 34384.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 33703.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 33491.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 32976.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 31722.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 31631.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 31506.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 31390.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 31066.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 30683.2
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 30288.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 30084.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 29903.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 29586.7
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 29451.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 29336.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 29239.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 29127.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 28840.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 28598.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 28554.8
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 28218.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 28074.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 27837.3
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 27835.4
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 27692.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 27564.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 27468.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 27216.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 26797.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 26552.2
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 26286.1
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 25814.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 25523.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 25028.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 24668.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 23855.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 23594.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 23435.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 23300.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 23219.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 23170.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 22801.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 22434.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 22404.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 22014.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 21830.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 21716.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 21660.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 21204.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 21137.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 20988.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 20876.3
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 20848.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 20696.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 20412.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 20390.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 19994.8
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 19988.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 19897.7
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 19896.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 19210.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 18533.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 18321.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 18168.1
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 18088.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 17757.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 17695.9
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 17563.4
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 17020.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 17005.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 16377.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 16078.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 15722.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 15273.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 15259.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 14515.6
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 14363.5
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 14164.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 14062.0
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 14060.4
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 13902.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 13396.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 12620.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 12608.0
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 11985.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 10742.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 9311.1
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SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6873.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 6412.0
Samples: 4

Max nTPM: 8373.0
Min nTPM: 4349.0
Sample A Female 8373.0
Sample B Female 7161.8
Sample C Male 4349.0
Sample D Male 5764.1
Ventral spinal cord
nTPM: 6873.3
Samples: 4

Max nTPM: 11632.4
Min nTPM: 2846.4
Sample A Female 11632.4
Sample B Female 2846.4
Sample C Male 7146.9
Sample D Male 5867.3

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