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  • TISSUE

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  • MT-ND5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:11765.2 nTPM
HPA Brain:26672.3 nTPM
GTEx:11765.2 nTPM
Pig:7852.6 nTPM
Mouse:4161.6 nTPM
Allen mouse:24.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26672.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 7772.0
2226 Male, age 75, left hemisphere 8704.5
1961 Female, age 42, unknown 6839.6
Dorsomedial nucleus
nTPM: 9960.9
1989 Male, age 62, unknown 14782.8
2017 Female, age 42, unknown 8894.9
2041 Female, age 72, unknown 6204.9
Lateral hypothalamic area
nTPM: 10400.7
2412 Male, age 62, unknown 25486.0
2271 Male, age 75, both hemispheres 7193.0
2228 Male, age 66, unknown 4584.6
1791 Male, age 80, right hemisphere 4339.2
Mammillary body
nTPM: 11903.9
2413 Male, age 66, unknown 15983.6
1948 Female, age 72, unknown 15300.9
1834 Female, age 42, unknown 14017.1
1945 Male, age 80, right hemisphere 8887.7
1923 Female, age 72, unknown 5330.2
Paraventricular nucleus
nTPM: 26672.3
2700 Male, age 62, unknown 26672.3
Preoptic area
nTPM: 11753.6
1861 Female, age 42, unknown 16513.2
2414 Female, age 72, unknown 13154.2
1907 Male, age 80, right hemisphere 5593.5
Supraoptic nucleus
nTPM: 11240.1
2835 Female, age 72, unknown 24550.1
2043 Male, age 62, unknown 5575.3
1894 Female, age 72, unknown 3594.8
Ventromedial nucleus
nTPM: 8519.9
1822 Female, age 42, unknown 8794.3
1982 Female, age 72, unknown 8245.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11765.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 11765.2
Samples: 257

Max nTPM: 93191.1
Min nTPM: 977.8
Std nTPM: 13039.2
Median nTPM: 7470.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 93191.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 90836.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 73748.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 57921.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 56182.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 52723.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 48411.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 48326.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 45331.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 43475.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 41882.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 39182.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 35764.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 33270.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 31686.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 31150.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 30714.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 30373.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 30351.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 29409.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 29333.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29189.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 28052.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26076.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 25870.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 25747.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 25365.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 25221.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 25169.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 24770.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 24520.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 24280.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 23270.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 22584.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 22183.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 21955.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 21605.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 21365.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 20949.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 20930.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 20671.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 20313.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 19406.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 19186.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 18275.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 17165.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 16829.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 16454.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 16433.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 16318.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 16315.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 15872.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 15813.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 15513.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 15333.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 14908.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 14727.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 14543.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 14457.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 14298.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 14223.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 14133.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 13765.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 13756.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13564.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 13374.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 13370.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 13309.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 12709.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 12689.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 12372.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 12223.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 12204.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 12202.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 11940.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 11881.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 11786.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 11349.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 11153.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 11140.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 11068.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 11003.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 10859.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 10735.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 10669.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 10383.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 10340.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 10307.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 9776.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 9757.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 9739.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 9723.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 9649.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 9598.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 9483.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 9390.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 9369.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 9357.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 9231.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 9160.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 9135.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 9104.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 9079.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 9042.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 8909.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 8886.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 8857.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 8847.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 8777.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 8762.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 8744.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 8551.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 8509.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 8429.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 8415.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 8314.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 8313.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 8275.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 8226.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 8178.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 8077.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 7896.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 7872.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 7696.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 7553.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 7536.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 7532.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 7474.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 7470.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 7375.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 7241.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 7219.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 7035.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 7027.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 7009.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 6999.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 6997.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 6942.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 6662.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 6648.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 6635.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 6618.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 6552.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 6488.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 6428.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 6391.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 6175.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 6124.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 6106.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 6078.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 5936.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 5914.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 5820.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 5693.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 5679.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 5594.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5539.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 5436.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 5426.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 5393.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 5338.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 5317.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 5276.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 5270.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 5242.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 5235.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 5226.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 5224.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 5215.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 5185.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 5178.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 5162.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 5090.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 5008.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 4896.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 4889.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 4837.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 4814.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 4735.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 4702.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 4661.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 4654.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 4612.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 4595.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 4592.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 4585.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 4584.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 4495.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 4492.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 4469.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 4465.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 4324.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 4309.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 4278.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 4265.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 4259.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 4222.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 4196.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4177.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 4166.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 4163.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 4127.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 4117.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 4067.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 4063.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 3998.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 3993.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 3992.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 3907.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 3890.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 3866.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 3864.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 3819.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 3818.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3795.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 3728.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 3711.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 3695.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 3597.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 3593.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 3592.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 3573.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 3572.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 3517.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 3286.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 3237.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 3133.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 3116.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 3110.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 3094.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 3086.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 2954.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 2893.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 2875.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 2848.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 2843.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 2840.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2800.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 2783.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 2716.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 2684.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 2683.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 2593.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 2567.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 2556.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 2465.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 2361.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 2275.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 2225.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2078.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1979.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 1975.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1906.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1761.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 1717.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 1256.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 977.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7852.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 7852.6
Samples: 4

Max nTPM: 10154.0
Min nTPM: 4836.7
Sample A Female 10154.0
Sample B Female 8604.7
Sample C Male 7814.8
Sample D Male 4836.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4161.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 4161.6
Samples: 4

Max nTPM: 4516.8
Min nTPM: 3588.6
Sample A Male 3588.6
Sample B Male 4516.8
Sample C Female 4228.5
Sample D Female 4312.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.6
75080269 Antisense, RP_060412_06_H09, Mouse strain C57BL/6J (56 days, male) 25.4
73906215 Antisense, RP_051212_04_H07, Mouse strain C57BL/6J (56 days, male) 23.7

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