HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:117.0 nTPM
HPA Brain:306.4 nTPM
GTEx:117.0 nTPM
FANTOM5:270.0 Scaled Tags Per Million
Pig:143.6 nTPM
Mouse:314.2 nTPM
Allen mouse:20.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046645
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 306.4
Sample id Sample description nTPM
Hippocampus
nTPM: 232.6
1898 Male, age 80, left hemisphere 296.1
2621 Female, age 67, right hemisphere 265.7
2148 Female, age 91, left hemisphere 259.5
1855 Male, age 76, left hemisphere 228.1
1911 Female, age 85, right hemisphere 185.6
2529 Female, age 94, left hemisphere 160.7
Dentate gyrus
nTPM: 258.3
1927 Female, age 91, both hemispheres 330.0
2530 Female, age 94, left hemisphere 290.0
2531 Female, age 67, both hemispheres 267.2
2010 Male, age 76, both hemispheres 239.0
2528 Male, age 74, both hemispheres 213.7
2246 Female, age 85, both hemispheres 210.1
Entorhinal gyrus
nTPM: 264.4
2613 Female, age 94, left hemisphere 371.0
2764 Male, age 80, right hemisphere 282.6
1938 Female, age 85, left hemisphere 260.2
2686 Male, age 75, right hemisphere 258.3
1787 Male, age 76, left hemisphere 249.8
2117 Female, age 91, right hemisphere 164.2
Hippocampus, CA1
nTPM: 270.6
2749 Male, age 80, left hemisphere 458.2
1873 Female, age 85, both hemispheres 262.5
2045 Male, age 76, both hemispheres 227.6
2527 Male, age 74, both hemispheres 217.9
2082 Female, age 91, right hemisphere 186.8
Hippocampus, CA2
nTPM: 244.6
1892 Male, age 76, both hemispheres 323.6
1963 Male, age 80, left hemisphere 319.2
2437 Female, age 94, left hemisphere 267.2
1940 Female, age 85, left hemisphere 192.2
2113 Female, age 91, right hemisphere 187.3
2249 Male, age 74, both hemispheres 178.2
Hippocampus, CA3
nTPM: 270.4
2137 Male, age 80, left hemisphere 345.0
2620 Female, age 94, left hemisphere 338.3
2861 Female, age 67, both hemispheres 308.8
1867 Male, age 76, both hemispheres 257.7
2436 Male, age 74, both hemispheres 187.0
1891 Female, age 85, both hemispheres 185.4
Parahippocampal cortex
nTPM: 256.0
2693 Female, age 94, both hemispheres 306.5
1850 Male, age 80, both hemispheres 287.3
2622 Female, age 67, right hemisphere 271.6
2245 Female, age 91, both hemispheres 269.4
1990 Female, age 91, right hemisphere 267.1
1933 Female, age 85, both hemispheres 253.7
2250 Female, age 67, right hemisphere 244.2
2532 Female, age 72, left hemisphere 236.6
2692 Male, age 74, both hemispheres 225.6
2018 Male, age 76, both hemispheres 197.9
Perirhinal gyrus
nTPM: 306.4
1847 Female, age 91, left hemisphere 357.7
2521 Female, age 94, right hemisphere 323.8
1794 Male, age 80, right hemisphere 315.4
1841 Female, age 85, right hemisphere 275.7
2848 Male, age 76, right hemisphere 259.3
Subiculum
nTPM: 206.9
1977 Female, age 85, both hemispheres 247.5
1901 Male, age 80, both hemispheres 230.8
2619 Male, age 74, both hemispheres 224.1
2438 Female, age 94, left hemisphere 198.9
2729 Female, age 91, right hemisphere 174.3
2042 Male, age 76, both hemispheres 165.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 117.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 117.0
Samples: 255

Max nTPM: 282.5
Min nTPM: 18.6
Std nTPM: 54.7
Median nTPM: 109.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 282.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 271.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 242.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 242.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 237.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 236.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 235.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 232.9
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 225.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 223.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 217.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 270.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 270.0
FF:10169-103B7 60 years, female 390.5
FF:10153-102I9 76 years, female 149.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 143.6
Pig sample Sample description nTPM
Subiculum
nTPM: 131.0
Samples: 4

Max nTPM: 166.7
Min nTPM: 108.7
Sample A Female 166.7
Sample B Female 117.7
Sample C Male 130.8
Sample D Male 108.7
Dorsal hippocampus
nTPM: 139.3
Samples: 4

Max nTPM: 160.1
Min nTPM: 100.3
Sample A Female 160.1
Sample B Female 156.9
Sample C Male 140.0
Sample D Male 100.3
Entorhinal cortex
nTPM: 143.6
Samples: 4

Max nTPM: 157.1
Min nTPM: 129.3
Sample A Female 155.7
Sample B Female 129.3
Sample C Male 157.1
Sample D Male 132.1
Ventral hippocampus
nTPM: 141.7
Samples: 4

Max nTPM: 177.1
Min nTPM: 99.3
Sample A Female 158.4
Sample B Female 99.3
Sample C Male 177.1
Sample D Male 132.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 314.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.2
Samples: 4

Max nTPM: 371.5
Min nTPM: 289.6
Sample A Male 289.6
Sample B Male 301.3
Sample C Female 294.5
Sample D Female 371.5
Hippocampal formation
nTPM: 311.3
Samples: 4

Max nTPM: 357.2
Min nTPM: 288.5
Sample A Male 288.5
Sample B Male 304.5
Sample C Female 357.2
Sample D Female 295.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 20.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.6
583561 Antisense, RP_040831_02_H11, Mouse strain C57BL/6J (56 days, male) 21.5
81599672 Antisense, RP_071219_04_G12, Mouse strain C57BL/6J (56 days, male) 19.6

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