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  • TISSUE

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  • MT-ND3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:58821.4 nTPM
HPA Brain:43577.1 nTPM
GTEx:58821.4 nTPM
Pig:18700.5 nTPM
Mouse:5755.7 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43577.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 8215.3
2226 Male, age 75, left hemisphere 9116.8
1961 Female, age 42, unknown 7313.9
Dorsomedial nucleus
nTPM: 12812.9
1989 Male, age 62, unknown 18704.6
2017 Female, age 42, unknown 11225.8
2041 Female, age 72, unknown 8508.3
Lateral hypothalamic area
nTPM: 13770.6
2412 Male, age 62, unknown 36696.2
2271 Male, age 75, both hemispheres 8222.9
2228 Male, age 66, unknown 5245.7
1791 Male, age 80, right hemisphere 4917.6
Mammillary body
nTPM: 16719.7
1948 Female, age 72, unknown 26093.1
2413 Male, age 66, unknown 20721.3
1834 Female, age 42, unknown 16937.3
1945 Male, age 80, right hemisphere 12995.2
1923 Female, age 72, unknown 6851.6
Paraventricular nucleus
nTPM: 43577.1
2700 Male, age 62, unknown 43577.1
Preoptic area
nTPM: 16316.4
1861 Female, age 42, unknown 23778.3
2414 Female, age 72, unknown 18132.3
1907 Male, age 80, right hemisphere 7038.6
Supraoptic nucleus
nTPM: 18460.9
2835 Female, age 72, unknown 43003.4
2043 Male, age 62, unknown 7520.2
1894 Female, age 72, unknown 4859.2
Ventromedial nucleus
nTPM: 9818.1
1822 Female, age 42, unknown 10318.7
1982 Female, age 72, unknown 9317.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58821.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 58821.4
Samples: 257

Max nTPM: 372871.0
Min nTPM: 7918.7
Std nTPM: 50198.4
Median nTPM: 42839.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 372871.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 311317.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 229154.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 227610.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 222909.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 214155.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 193899.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 190379.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 185489.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 180434.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 177565.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 174581.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 174338.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 168905.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 161189.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 159498.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 155996.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 145940.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 142475.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 135346.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 127637.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 123618.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 122668.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 119344.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 116915.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 116515.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 115356.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 115209.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 114851.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 112706.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 112551.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 112137.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 111947.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 106871.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 106795.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 105530.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 100747.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 100333.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 95676.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 92369.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 91512.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 90565.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 90375.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 89006.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86156.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 83897.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 83240.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 81645.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 81029.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 80138.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 79535.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 78689.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 77566.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 76490.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 76382.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 74436.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 73656.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 73505.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 72637.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 72596.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 71158.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 70609.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 70160.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 69564.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 67593.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 67408.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 67195.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 66597.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 66025.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 65960.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 65782.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 64798.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 64425.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 64324.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 63487.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63435.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 63346.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 63291.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 62739.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 62196.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 60537.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 59826.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 59328.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 57889.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 57806.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 57581.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 57299.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 57177.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 56930.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 56716.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 56504.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 56488.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 56092.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 55309.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 55205.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 55093.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 53992.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 53808.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 51856.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 51600.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 50999.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 50793.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 50631.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 49660.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 48730.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 48715.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 48609.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 48197.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 48179.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 47987.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47704.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 47417.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 47410.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46180.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 46169.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 46028.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 45643.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 45557.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 45489.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 45241.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 45149.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 44430.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 44405.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 44116.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 43812.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 43544.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43246.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 43065.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42839.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 42601.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 42291.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 42018.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41881.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 41474.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 41423.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 41259.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 41255.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 41237.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 40889.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 40791.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 40512.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 40504.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 40127.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 38980.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 38862.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 38643.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 38595.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 38392.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38361.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 38234.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 38131.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 37989.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 37496.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 37483.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 37478.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37473.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 37344.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 36698.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 35659.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 34480.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 34274.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 34118.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 33942.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 33918.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 33608.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 33410.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 33160.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 32588.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 32442.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 31934.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 31914.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 31436.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 31421.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31365.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 31048.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 30839.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 30837.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 30686.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 30202.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 30077.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 30074.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 29824.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 29811.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 29691.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 29690.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 29433.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 29368.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 29194.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 29137.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 28987.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 28806.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 28396.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 28268.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 27902.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 27648.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 27479.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 27331.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 27321.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 27320.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 27263.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 27255.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 27250.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 26315.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 26059.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 25890.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 25332.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 25082.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 24812.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 24789.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 24448.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 23878.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 23872.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 23812.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 23750.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 23665.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 23512.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 23244.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 23188.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 23105.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 23094.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23027.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 22837.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 22774.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22770.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 22580.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 22525.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 22393.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 21871.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 21815.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 21114.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 19978.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 19024.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18917.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 18568.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 18168.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 17864.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 17066.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 16804.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 16798.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 16585.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 16299.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 16244.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 15782.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 15537.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 14916.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14833.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 14608.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 14337.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 14189.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 13623.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 12706.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 11720.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 10762.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 10290.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 9762.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 8954.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 7918.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18700.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 18700.6
Samples: 4

Max nTPM: 23173.2
Min nTPM: 10219.8
Sample A Female 23173.2
Sample B Female 21956.8
Sample C Male 19452.4
Sample D Male 10219.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5755.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 5755.6
Samples: 4

Max nTPM: 6912.2
Min nTPM: 4052.6
Sample A Male 4052.6
Sample B Male 6078.3
Sample C Female 6912.2
Sample D Female 5979.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
73949734 Antisense, RP_051219_02_B05, Mouse strain C57BL/6J (56 days, male) 0.0

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