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RPL39
HPA
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:5244.2 nTPM
HPA:5244.2 nTPM
GTEx:4583.7 nTPM
FANTOM5:53.4 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047105
Ovarian stroma cells Not detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5244.2
overview
Female, age 64
Ovary sample 192
nTPM: 2596.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 4395.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 3766.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 3409.4
N/A
Female, age 16
Ovary sample 3663
nTPM: 15430.8
N/A
Female, age 20
Ovary sample 3664
nTPM: 4457.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 2652.9

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4583.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4583.7
Samples: 193

Max nTPM: 12810.7
Min nTPM: 1698.9
Std nTPM: 1968.4
Median nTPM: 4002.2
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 12810.7
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 11440.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 11387.0
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 11027.0
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 10347.4
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 9927.8
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 9885.3
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 9858.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 8955.0
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 8904.9
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 8902.7
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 8801.2
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 8196.6
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 7619.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 7591.7
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 7433.6
GTEX-QVJO-3126-SM-COH22 60-69 years, female 7367.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 7281.0
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 6940.6
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 6884.9
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 6856.6
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 6663.5
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 6659.3
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 6581.7
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 6561.4
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6549.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 6529.6
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 6447.3
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 6404.2
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 6370.7
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 6226.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 6172.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 6172.1
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 6142.8
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 6045.5
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 6005.9
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 5948.9
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 5893.8
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 5863.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 5860.5
GTEX-R45C-2526-SM-GRR28 60-69 years, female 5860.4
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 5814.9
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 5795.5
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 5778.9
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 5648.4
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 5587.3
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 5566.2
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 5363.1
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5352.9
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 5286.1
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 5282.1
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 5143.8
GTEX-14BIN-1426-SM-664NI 50-59 years, female 5086.2
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 5042.5
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 4978.3
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 4952.2
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 4943.1
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 4940.5
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 4920.0
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 4873.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 4830.0
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 4825.7
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 4823.9
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 4817.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 4811.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 4778.5
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 4764.5
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 4704.5
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 4684.3
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 4663.5
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 4658.1
GTEX-13SLX-2426-SM-664OM 50-59 years, female 4654.8
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 4581.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 4562.0
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 4549.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 4496.4
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 4491.4
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 4455.8
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 4454.3
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 4401.7
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 4386.3
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4337.4
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 4305.3
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 4263.8
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 4198.4
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4153.2
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 4143.7
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 4131.9
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 4114.8
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 4059.6
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 4051.9
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 4051.8
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 4046.6
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 4039.8
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 4015.6
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 4009.0
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 4002.2
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 3947.2
GTEX-P78B-1926-SM-3P616 40-49 years, female 3944.7
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 3934.4
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 3931.6
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3927.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 3927.4
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 3926.4
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 3918.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 3912.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 3901.5
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3877.0
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 3805.6
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 3793.5
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3753.5
GTEX-QCQG-1426-SM-48U22 50-59 years, female 3739.7
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 3722.0
GTEX-11I78-1926-SM-59878 50-59 years, female 3715.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 3676.6
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 3669.3
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3658.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 3654.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 3648.1
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 3639.9
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 3632.3
GTEX-18D9A-0826-SM-718C1 30-39 years, female 3628.6
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 3607.4
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 3592.3
GTEX-S341-0726-SM-4AD5R 40-49 years, female 3579.2
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 3576.6
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3569.8
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 3558.7
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 3555.6
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3546.9
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 3532.7
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 3516.2
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3505.4
GTEX-14PKV-1226-SM-6871T 20-29 years, female 3503.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 3495.6
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 3492.8
GTEX-145ME-1226-SM-5MR87 40-49 years, female 3446.3
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 3442.9
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3439.6
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 3355.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 3351.8
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 3334.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3327.2
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 3310.8
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3291.0
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3280.7
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 3277.8
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 3262.2
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3258.9
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3253.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 3246.4
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 3217.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 3202.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3190.6
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 3172.9
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 3145.3
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 3143.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 3126.3
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 3094.4
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 3078.4
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2980.8
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2978.9
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2968.5
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2934.2
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2919.7
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2885.1
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 2881.2
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2865.6
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2863.7
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2857.4
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2752.2
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 2748.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2700.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2654.2
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2636.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2611.5
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2606.8
GTEX-14JG6-0626-SM-68716 30-39 years, female 2600.9
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2597.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2587.3
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2578.6
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2567.1
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2475.5
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2453.8
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2363.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2345.9
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2277.1
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 2257.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2239.8
GTEX-R55G-1526-SM-48FER 40-49 years, female 2130.3
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2037.1
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1779.9
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1698.9
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 53.4
FF:10020-101D2 47,75,84 years, female 53.4

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