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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
691.2
nTPM
Monaco:
411.7
nTPM
Schmiedel:
8.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
691.2
HPA sample
nTPM
gdT-cell nTPM: 315.5
Samples: 6
Max nTPM: 380.7
Min nTPM: 236.1
P10809_1007
236.1
P10809_1022
308.1
P10809_1041
380.7
P10809_1060
281.9
P10809_1077
327.3
P10809_1098
358.7
MAIT T-cell nTPM: 285.7
Samples: 6
Max nTPM: 375.7
Min nTPM: 224.0
P10809_1006
224.0
P10809_1024
247.7
P10809_1043
314.6
P10809_1062
297.4
P10809_1083
254.8
P10809_1097
375.7
Memory CD4 T-cell nTPM: 438.9
Samples: 6
Max nTPM: 572.5
Min nTPM: 350.7
P10809_1014
381.4
P10809_1026
572.5
P10809_1045
408.1
P10809_1064
432.6
P10809_1086
350.7
P10809_1113
487.8
Memory CD8 T-cell nTPM: 412.4
Samples: 5
Max nTPM: 500.5
Min nTPM: 335.3
P10809_1012
402.3
P10809_1027
383.7
P10809_1046
440.3
P10809_1065
335.3
P10809_1111
500.5
Naive CD4 T-cell nTPM: 290.2
Samples: 6
Max nTPM: 375.3
Min nTPM: 249.2
P10809_1015
249.2
P10809_1030
255.9
P10809_1049
271.0
P10809_1068
287.8
P10809_1085
302.0
P10809_1112
375.3
Naive CD8 T-cell nTPM: 320.3
Samples: 6
Max nTPM: 364.9
Min nTPM: 284.3
P10809_1016
284.3
P10809_1031
291.6
P10809_1050
297.8
P10809_1069
364.9
P10809_1087
327.2
P10809_1110
355.9
T-reg nTPM: 691.2
Samples: 6
Max nTPM: 818.9
Min nTPM: 585.7
P10809_1018
645.4
P10809_1037
585.7
P10809_1056
818.9
P10809_1075
663.8
P10809_1094
779.1
P10809_1106
654.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
411.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 281.8
Samples: 4
Max nTPM: 420.5
Min nTPM: 196.7
RHH5202_R3573
242.1
RHH5230_R3602
267.7
RHH5259_R3631
196.7
RHH5288_R3660
420.5
Effector memory CD8 T-cell nTPM: 293.9
Samples: 4
Max nTPM: 412.7
Min nTPM: 198.1
RHH5203_R3574
320.2
RHH5231_R3603
412.7
RHH5260_R3632
244.5
RHH5289_R3661
198.1
MAIT T-cell nTPM: 221.8
Samples: 4
Max nTPM: 301.4
Min nTPM: 94.7
RHH5233_R3605
223.4
RHH5205_R3576
94.7
RHH5262_R3634
267.8
RHH5297_R3663
301.4
Memory CD4 T-cell TFH nTPM: 411.7
Samples: 4
Max nTPM: 577.8
Min nTPM: 275.4
RHH5300_R3666
425.5
RHH5236_R3608
577.8
RHH5265_R3637
368.1
RHH5208_R3579
275.4
Memory CD4 T-cell Th1 nTPM: 302.5
Samples: 4
Max nTPM: 460.0
Min nTPM: 219.6
RHH5210_R3581
219.6
RHH5302_R3668
460.0
RHH5238_R3610
261.6
RHH5267_R3639
268.7
Memory CD4 T-cell Th1/Th17 nTPM: 285.6
Samples: 4
Max nTPM: 392.9
Min nTPM: 145.8
RHH5303_R3669
392.9
RHH5211_R3582
361.8
RHH5239_R3611
145.8
RHH5268_R3640
241.8
Memory CD4 T-cell Th17 nTPM: 235.3
Samples: 4
Max nTPM: 344.0
Min nTPM: 163.1
RHH5304_R3670
236.0
RHH5212_R3583
344.0
RHH5240_R3612
163.1
RHH5269_R3641
197.9
Memory CD4 T-cell Th2 nTPM: 325.2
Samples: 4
Max nTPM: 389.3
Min nTPM: 267.1
RHH5305_R3671
315.1
RHH5213_R3584
267.1
RHH5241_R3613
389.3
RHH5270_R3642
329.3
Naive CD4 T-cell nTPM: 249.8
Samples: 4
Max nTPM: 295.2
Min nTPM: 191.9
RHH5306_R3672
295.2
RHH5214_R3585
264.5
RHH5242_R3614
247.4
RHH5271_R3643
191.9
Naive CD8 T-cell nTPM: 170.0
Samples: 4
Max nTPM: 312.4
Min nTPM: 76.4
RHH5201_R3572
76.4
RHH5229_R3601
116.2
RHH5258_R3630
312.4
RHH5287_R3659
175.0
Non-Vd2 gdTCR nTPM: 264.7
Samples: 4
Max nTPM: 435.8
Min nTPM: 142.0
RHH5235_R3607
142.0
RHH5264_R3636
330.6
RHH5207_R3578
150.3
RHH5299_R3665
435.8
T-reg nTPM: 320.5
Samples: 4
Max nTPM: 445.5
Min nTPM: 196.6
RHH5301_R3667
445.5
RHH5237_R3609
421.3
RHH5266_R3638
218.7
RHH5209_R3580
196.6
Terminal effector memory CD4 T-cell nTPM: 251.2
Samples: 2
Max nTPM: 291.1
Min nTPM: 211.3
RHH5243_R3615
211.3
RHH5272_R3644
291.1
Terminal effector memory CD8 T-cell nTPM: 299.2
Samples: 4
Max nTPM: 352.9
Min nTPM: 210.7
RHH5232_R3604
337.6
RHH5204_R3575
295.5
RHH5261_R3633
210.7
RHH5296_R3662
352.9
Vd2 gdTCR nTPM: 288.9
Samples: 4
Max nTPM: 344.5
Min nTPM: 194.3
RHH5234_R3606
307.9
RHH5206_R3577
308.8
RHH5263_R3635
194.3
RHH5298_R3664
344.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.