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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RACK1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:234.3 nTPM
GTEx:356.9 nTPM
FANTOM5:472.7 Scaled Tags Per Million
Macaque:146.6 nTPM
Pig:137.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

234.3
Sample id Sample description nTPM
Putamen
nTPM: 234.3
2482 Female, age 94, left hemisphere 267.3
2489 Female, age 72, unknown 256.2
2466 Female, age 79, unknown 253.1
2647 Male, age 75, left hemisphere 223.5
1937 Female, age 91, right hemisphere 222.1
1829 Male, age 74, unknown 212.0
1838 Male, age 80, right hemisphere 205.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

356.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 356.9
Samples: 254

Max nTPM: 837.0
Min nTPM: 207.7
Std nTPM: 75.9
Median nTPM: 347.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 837.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 582.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 562.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 555.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 544.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 535.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 526.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 509.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 506.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 504.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 504.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 495.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 495.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 488.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 481.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 480.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 476.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 474.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 474.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 474.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 472.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 468.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 467.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 462.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 460.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 459.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 457.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 455.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 454.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 453.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 452.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 451.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 449.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 443.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 439.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 438.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 436.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 427.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 425.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 423.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 421.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 421.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 420.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 419.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 418.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 416.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 412.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 412.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 410.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 410.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 409.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 406.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 406.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 404.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 403.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 402.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 402.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 402.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 400.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 399.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 398.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 397.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 396.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 395.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 393.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 393.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 392.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 392.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 391.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 389.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 389.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 388.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 387.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 386.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 384.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 384.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 383.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 383.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 380.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 380.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 380.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 378.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 378.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 378.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 376.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 375.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 373.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 373.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 372.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 371.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 371.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 370.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 370.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 369.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 368.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 368.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 368.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 367.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 366.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 363.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 362.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 362.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 361.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 361.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 360.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 360.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 359.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 359.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 358.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 357.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 355.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 355.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 354.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 354.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 354.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 354.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 353.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 353.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 352.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 352.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 351.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 351.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 350.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 349.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 349.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 349.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 348.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 345.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 344.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 344.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 343.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 343.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 343.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 342.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 341.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 339.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 339.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 338.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 338.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 336.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 335.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 333.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 333.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 332.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 331.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 331.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 331.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 330.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 329.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 328.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 327.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 325.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 324.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 324.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 324.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 324.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 323.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 323.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 322.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 322.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 321.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 320.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 318.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 318.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 317.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 317.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 316.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 315.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 315.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 314.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 313.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 313.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 313.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 312.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 312.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 312.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 312.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 311.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 311.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 311.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 309.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 308.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 308.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 307.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 307.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 307.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 306.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 305.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 305.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 305.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 305.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 305.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 304.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 303.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 302.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 301.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 301.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 299.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 299.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 297.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 297.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 297.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 296.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 295.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 294.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 293.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 292.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 292.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 292.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 291.7
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 291.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 289.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 289.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 289.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 287.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 287.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 285.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 285.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 284.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 284.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 283.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 283.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 280.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 280.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 279.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 279.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 278.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 278.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 277.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 277.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 274.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 274.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 271.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 269.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 265.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 264.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 264.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 262.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 261.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 261.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 258.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 257.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 255.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 254.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 251.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 250.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 250.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 249.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 246.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 244.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 241.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 240.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 236.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 207.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

472.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 472.7
FF:10176-103C5 60 years, female 472.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.6
Macaque sample Sample description nTPM
Putamen
nTPM: 146.6
Samples: 2

Max nTPM: 150.9
Min nTPM: 142.2
Sample A 150.9
Sample B 142.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.7
Pig sample Sample description nTPM
Putamen
nTPM: 137.7
Samples: 3

Max nTPM: 151.9
Min nTPM: 115.8
Sample B Female 115.8
Sample C Male 151.9
Sample D Male 145.3

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