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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • LRRC10B
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:91.0 nTPM
GTEx:59.2 nTPM
FANTOM5:29.9 Scaled Tags Per Million
Pig:49.4 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.0
Sample id Sample description nTPM
Putamen
nTPM: 91.0
2489 Female, age 72, unknown 120.8
2466 Female, age 79, unknown 115.7
2647 Male, age 75, left hemisphere 111.5
1829 Male, age 74, unknown 103.8
1838 Male, age 80, right hemisphere 71.6
1937 Female, age 91, right hemisphere 68.1
2482 Female, age 94, left hemisphere 45.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 59.2
Samples: 254

Max nTPM: 185.2
Min nTPM: 5.8
Std nTPM: 32.0
Median nTPM: 57.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 185.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 145.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 143.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 138.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 135.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 126.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 124.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 121.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 121.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 118.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 118.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 117.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 116.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 115.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 113.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 110.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 109.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 109.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 109.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 108.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 108.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 106.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 106.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 104.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 103.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 102.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 102.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 102.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 102.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 98.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 98.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 98.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 97.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 96.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 96.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 96.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 94.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 94.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 94.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 93.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 91.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 89.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 89.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 89.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 87.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 87.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 87.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 86.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 86.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 86.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 85.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 85.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 84.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 84.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 84.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 83.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 83.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 83.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 81.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 81.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 81.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 80.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 80.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 80.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 80.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 79.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 77.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 77.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 75.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 75.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 75.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 74.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 74.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 74.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 73.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 73.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 73.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 72.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 72.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 71.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 71.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 71.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 71.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 70.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 70.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 70.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 70.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 69.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 68.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 68.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 68.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 68.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 67.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 66.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 66.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 65.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 65.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 64.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 64.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 63.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 63.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 62.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 62.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 61.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 61.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 60.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 60.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 60.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 60.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 60.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 59.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 58.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 58.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 58.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 58.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 58.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 57.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 57.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 57.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 57.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 56.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 56.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 56.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 55.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 55.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 54.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 54.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 54.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 54.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 54.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 53.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 53.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 52.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 52.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 50.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 49.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 49.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 48.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 48.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 48.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 47.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 47.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 47.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 46.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 46.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 46.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 46.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 45.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 44.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 44.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 43.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 42.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 41.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 39.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 39.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 38.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 37.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 37.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 36.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 36.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 36.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 36.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 35.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 35.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 35.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 35.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 35.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 35.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 35.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 35.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 34.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 33.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 33.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 31.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 30.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 30.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 29.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 29.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 29.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 26.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 26.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 25.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 25.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 25.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 25.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 24.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 24.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 23.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 23.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 23.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 23.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 22.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 20.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 20.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 19.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 17.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 16.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 16.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 15.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 15.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 14.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 14.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 13.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 11.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 10.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 9.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 9.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 8.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 8.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 8.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 7.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 6.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 5.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 29.9
FF:10176-103C5 60 years, female 29.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.4
Pig sample Sample description nTPM
Putamen
nTPM: 49.4
Samples: 3

Max nTPM: 56.8
Min nTPM: 45.3
Sample B Female 45.3
Sample C Male 56.8
Sample D Male 46.1

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