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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PRR13
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN67 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:86.7 nTPM
GTEx:105.6 nTPM
FANTOM5:131.4 Scaled Tags Per Million
Macaque:35.8 nTPM
Pig:83.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.7
Sample id Sample description nTPM
Putamen
nTPM: 86.7
2647 Male, age 75, left hemisphere 100.4
1838 Male, age 80, right hemisphere 99.5
2482 Female, age 94, left hemisphere 93.2
1829 Male, age 74, unknown 86.5
1937 Female, age 91, right hemisphere 80.0
2489 Female, age 72, unknown 75.9
2466 Female, age 79, unknown 71.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 105.6
Samples: 254

Max nTPM: 227.5
Min nTPM: 65.0
Std nTPM: 27.2
Median nTPM: 99.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 227.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 226.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 204.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 200.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 200.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 194.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 189.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 181.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 176.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 168.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 168.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 162.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 161.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 157.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 157.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 155.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 155.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 155.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 147.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 145.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 142.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 142.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 139.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 138.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 135.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 135.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 134.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 134.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 132.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 131.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 131.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 131.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 129.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 129.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 128.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 126.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 126.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 125.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 125.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 125.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 125.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 124.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 124.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 124.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 123.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 121.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 121.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 121.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 120.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 120.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 120.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 120.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 120.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 118.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 118.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 118.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 117.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 117.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 116.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 116.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 116.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 116.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 115.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 115.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 115.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 115.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 114.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 114.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 114.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 113.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 113.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 112.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 112.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 112.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 112.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 112.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 111.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 110.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 110.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 109.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 109.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 109.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 109.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 109.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 109.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 108.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 108.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 108.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 107.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 106.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 106.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 106.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 106.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 106.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 106.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 106.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 105.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 105.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 105.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 105.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 105.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 105.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 105.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 104.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 104.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 104.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 103.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 103.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 103.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 103.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 102.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 102.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 102.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 102.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 101.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 101.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 101.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 101.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 101.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 100.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 100.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 100.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 100.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 99.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 99.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 99.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 99.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 99.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 99.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 99.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 98.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 98.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 98.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 98.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 98.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 97.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 97.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 97.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 97.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 97.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 97.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 97.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 96.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 96.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 96.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 96.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 96.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 96.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 96.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 95.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 95.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 95.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 95.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 95.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 95.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 95.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 94.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 94.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 94.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 93.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 93.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 93.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 93.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 93.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 93.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 92.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 92.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 92.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 92.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 92.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 92.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 91.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 90.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 90.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 90.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 90.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 90.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 90.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 90.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 89.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 88.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 88.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 88.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 88.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 88.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 87.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 86.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 86.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 86.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 86.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 86.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 86.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 86.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 86.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 86.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 86.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 86.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 85.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 85.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 85.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 85.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 84.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 84.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 84.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 84.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 83.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 83.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 83.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 83.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 83.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 82.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 82.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 82.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 82.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 82.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 81.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 81.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 81.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 80.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 80.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 80.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 80.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 79.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 79.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 79.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 79.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 79.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 78.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 77.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 77.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 76.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 74.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 74.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 74.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 74.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 74.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 73.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 73.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 72.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 72.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 70.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 69.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 68.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 68.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 67.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 65.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

131.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 131.4
FF:10176-103C5 60 years, female 131.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.8
Macaque sample Sample description nTPM
Putamen
nTPM: 35.8
Samples: 2

Max nTPM: 40.4
Min nTPM: 31.1
Sample A 31.1
Sample B 40.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.9
Pig sample Sample description nTPM
Putamen
nTPM: 83.9
Samples: 3

Max nTPM: 96.2
Min nTPM: 64.0
Sample B Female 64.0
Sample C Male 96.2
Sample D Male 91.5

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