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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • PRR13
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN67 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:131.8 nTPM
HPA Brain:119.0 nTPM
GTEx:131.8 nTPM
FANTOM5:109.6 Scaled Tags Per Million
Macaque:97.5 nTPM
Pig:152.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity ND
Sample Intensity
Spinal cord_01
ND
Spinal cord_02
ND
Spinal cord_03
ND
Spinal cord_04
ND
Spinal cord_05
ND
Spinal cord_06
ND
Spinal cord_07
ND
Spinal cord_08
ND

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.0
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 118.2
2819 Male, age 47, both hemispheres 140.2
2818 Female, age 79, both hemispheres 122.5
2193 Male, age 75, both hemispheres 111.8
2734 Male, age 80, both hemispheres 98.2
Cervical spinal cord, central gray
nTPM: 115.8
2565 Male, age 75, midline 134.0
2194 Female, age 79, both hemispheres 114.3
1981 Female, age 72, midline 114.2
2816 Male, age 47, midline 110.8
2048 Male, age 55, midline 105.8
Cervical spinal cord, dorsal horn
nTPM: 108.1
2173 Female, age 72, unknown 119.1
2297 Male, age 75, both hemispheres 118.7
2721 Male, age 90, both hemispheres 116.3
1877 Male, age 55, unknown 99.9
2296 Male, age 66, both hemispheres 99.6
2069 Male, age 47, both hemispheres 95.1
Cervical spinal cord, ventral horn
nTPM: 119.0
2820 Female, age 79, both hemispheres 134.1
2809 Male, age 90, both hemispheres 130.7
2295 Male, age 66, both hemispheres 118.7
2098 Female, age 72, unknown 117.7
2480 Male, age 75, both hemispheres 113.3
2068 Male, age 55, unknown 99.5
Dorsal funiculus (white matter)
nTPM: 108.1
2128 Male, age 75, both hemispheres 114.4
2810 Male, age 90, both hemispheres 114.1
2817 Male, age 47, both hemispheres 106.4
2064 Female, age 79, both hemispheres 105.2
2812 Male, age 66, both hemispheres 100.4
Lateral funiculus (white matter)
nTPM: 110.4
2294 Male, age 66, both hemispheres 126.8
2192 Male, age 75, both hemispheres 119.7
2094 Female, age 79, both hemispheres 108.5
2099 Male, age 90, both hemispheres 86.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 131.8
Samples: 204

Max nTPM: 251.4
Min nTPM: 86.4
Std nTPM: 25.6
Median nTPM: 128.6
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 251.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 224.1
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 211.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 199.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 197.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 193.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 188.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 178.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 177.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 175.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 174.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 174.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 172.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 172.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 172.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 171.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 171.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 170.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 169.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 166.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 164.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 160.7
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 160.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 160.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 160.3
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 159.6
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 159.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 158.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 158.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 158.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 157.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 155.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 155.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 154.1
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 153.8
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 151.5
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 151.3
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 151.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 150.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 149.9
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 149.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 148.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 148.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 148.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 148.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 148.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 148.0
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 147.5
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 147.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 145.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 145.5
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 145.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 144.4
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 144.2
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 144.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 143.8
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 143.7
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 143.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 142.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 142.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 142.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 141.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 140.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 139.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 138.2
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 137.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 137.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 137.5
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 137.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 136.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 136.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 136.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 135.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 135.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 135.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 135.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 135.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 135.6
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 135.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 135.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 134.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 134.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 134.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 134.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 134.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 133.4
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 133.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 133.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 133.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 132.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 132.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 131.2
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 131.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 130.9
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 130.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 130.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 129.7
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 129.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 129.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 129.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 129.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 128.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 128.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 128.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 128.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 127.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 127.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 126.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 126.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 125.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 125.6
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 125.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 125.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 125.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 124.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 123.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 123.6
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 123.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 123.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 123.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 122.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 122.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 122.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 122.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 122.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 122.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 122.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 121.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 121.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 121.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 121.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 120.9
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 120.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 120.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 120.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 120.0
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 118.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 117.9
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 117.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 117.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 117.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 117.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 116.9
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 116.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 115.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 115.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 115.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 115.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 114.9
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 114.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 114.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 113.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 113.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 113.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 112.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 112.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 112.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 112.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 112.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 112.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 111.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 110.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 110.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 109.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 109.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 108.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 108.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 107.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 107.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 107.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 107.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 106.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 106.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 106.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 106.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 106.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 106.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 106.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 105.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 105.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 105.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 105.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 105.4
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 104.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 104.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 103.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 103.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 102.9
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 101.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 101.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 99.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 99.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 99.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 99.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 96.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 95.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 93.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 92.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 90.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 90.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 87.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 87.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 87.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 86.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

109.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 109.6
FF:10181-103D1 60 years, female 121.8
FF:10159-103A6 76 years, female 97.5

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.5
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 88.7
Samples: 2

Max nTPM: 93.9
Min nTPM: 83.5
Sample A 83.5
Sample B 93.9
Ventral spinal cord
nTPM: 97.5
Samples: 1

Max nTPM: 97.5
Min nTPM: 97.5
Sample A 97.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 128.4
Samples: 4

Max nTPM: 154.9
Min nTPM: 112.8
Sample A Female 112.8
Sample B Female 123.1
Sample C Male 154.9
Sample D Male 122.6
Ventral spinal cord
nTPM: 152.5
Samples: 4

Max nTPM: 166.6
Min nTPM: 144.2
Sample A Female 145.7
Sample B Female 144.2
Sample C Male 166.6
Sample D Male 153.4

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