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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.7
nTPM
Monaco:
76.4
nTPM
Schmiedel:
143.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.7
HPA sample
nTPM
gdT-cell nTPM: 0.6
Samples: 6
Max nTPM: 1.9
Min nTPM: 0.0
P10809_1007
1.9
P10809_1022
0.6
P10809_1041
0.0
P10809_1060
0.4
P10809_1077
0.0
P10809_1098
0.5
MAIT T-cell nTPM: 14.7
Samples: 6
Max nTPM: 27.8
Min nTPM: 3.4
P10809_1006
27.7
P10809_1024
17.5
P10809_1043
3.4
P10809_1062
27.8
P10809_1083
7.4
P10809_1097
4.5
Memory CD4 T-cell nTPM: 34.8
Samples: 6
Max nTPM: 58.9
Min nTPM: 13.5
P10809_1014
56.8
P10809_1026
58.9
P10809_1045
23.7
P10809_1064
38.2
P10809_1086
13.5
P10809_1113
17.6
Memory CD8 T-cell nTPM: 47.9
Samples: 5
Max nTPM: 129.7
Min nTPM: 8.1
P10809_1012
33.2
P10809_1027
14.6
P10809_1046
129.7
P10809_1065
54.0
P10809_1111
8.1
Naive CD4 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 79.0
Min nTPM: 21.0
P10809_1015
66.4
P10809_1030
64.3
P10809_1049
32.4
P10809_1068
79.0
P10809_1085
21.0
P10809_1112
31.4
Naive CD8 T-cell nTPM: 21.4
Samples: 6
Max nTPM: 42.9
Min nTPM: 0.8
P10809_1016
42.9
P10809_1031
31.5
P10809_1050
15.8
P10809_1069
25.5
P10809_1087
0.8
P10809_1110
11.6
T-reg nTPM: 81.7
Samples: 6
Max nTPM: 136.3
Min nTPM: 31.6
P10809_1018
114.8
P10809_1037
79.1
P10809_1056
81.4
P10809_1075
136.3
P10809_1094
31.6
P10809_1106
47.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 37.7
Samples: 4
Max nTPM: 68.0
Min nTPM: 15.4
RHH5202_R3573
43.1
RHH5230_R3602
24.3
RHH5259_R3631
15.4
RHH5288_R3660
68.0
Effector memory CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 32.9
Min nTPM: 8.1
RHH5203_R3574
32.9
RHH5231_R3603
17.2
RHH5260_R3632
8.1
RHH5289_R3661
12.1
MAIT T-cell nTPM: 57.0
Samples: 4
Max nTPM: 112.5
Min nTPM: 2.6
RHH5233_R3605
112.5
RHH5205_R3576
2.6
RHH5262_R3634
98.6
RHH5297_R3663
14.3
Memory CD4 T-cell TFH nTPM: 74.9
Samples: 4
Max nTPM: 80.0
Min nTPM: 67.7
RHH5300_R3666
79.1
RHH5236_R3608
67.7
RHH5265_R3637
72.8
RHH5208_R3579
80.0
Memory CD4 T-cell Th1 nTPM: 52.8
Samples: 4
Max nTPM: 112.2
Min nTPM: 17.0
RHH5210_R3581
45.3
RHH5302_R3668
112.2
RHH5238_R3610
17.0
RHH5267_R3639
36.5
Memory CD4 T-cell Th1/Th17 nTPM: 57.1
Samples: 4
Max nTPM: 85.8
Min nTPM: 31.5
RHH5303_R3669
85.8
RHH5211_R3582
71.6
RHH5239_R3611
31.5
RHH5268_R3640
39.3
Memory CD4 T-cell Th17 nTPM: 43.4
Samples: 4
Max nTPM: 76.7
Min nTPM: 22.9
RHH5304_R3670
32.9
RHH5212_R3583
76.7
RHH5240_R3612
41.1
RHH5269_R3641
22.9
Memory CD4 T-cell Th2 nTPM: 47.8
Samples: 4
Max nTPM: 81.1
Min nTPM: 23.0
RHH5305_R3671
57.9
RHH5213_R3584
23.0
RHH5241_R3613
81.1
RHH5270_R3642
29.0
Naive CD4 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 97.6
Min nTPM: 50.5
RHH5306_R3672
97.6
RHH5214_R3585
88.1
RHH5242_R3614
69.5
RHH5271_R3643
50.5
Naive CD8 T-cell nTPM: 35.6
Samples: 4
Max nTPM: 48.9
Min nTPM: 15.2
RHH5201_R3572
48.9
RHH5229_R3601
15.2
RHH5258_R3630
47.3
RHH5287_R3659
31.0
Non-Vd2 gdTCR nTPM: 0.3
Samples: 4
Max nTPM: 1.3
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
1.3
RHH5299_R3665
0.0
T-reg nTPM: 75.5
Samples: 4
Max nTPM: 127.1
Min nTPM: 50.2
RHH5301_R3667
127.1
RHH5237_R3609
63.5
RHH5266_R3638
61.0
RHH5209_R3580
50.2
Terminal effector memory CD4 T-cell nTPM: 16.7
Samples: 2
Max nTPM: 27.9
Min nTPM: 5.4
RHH5243_R3615
5.4
RHH5272_R3644
27.9
Terminal effector memory CD8 T-cell nTPM: 26.7
Samples: 4
Max nTPM: 100.0
Min nTPM: 0.0
RHH5232_R3604
0.0
RHH5204_R3575
100.0
RHH5261_R3633
0.0
RHH5296_R3662
6.9
Vd2 gdTCR nTPM: 3.4
Samples: 4
Max nTPM: 5.1
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
3.2
RHH5263_R3635
5.1
RHH5298_R3664
5.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.