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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
354.5
nTPM
Monaco:
948.1
nTPM
Schmiedel:
56.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
354.5
HPA sample
nTPM
gdT-cell nTPM: 35.2
Samples: 6
Max nTPM: 51.9
Min nTPM: 26.7
P10809_1007
30.4
P10809_1022
44.0
P10809_1041
51.9
P10809_1060
28.3
P10809_1077
26.7
P10809_1098
29.7
MAIT T-cell nTPM: 354.5
Samples: 6
Max nTPM: 530.1
Min nTPM: 210.2
P10809_1006
210.2
P10809_1024
486.7
P10809_1043
530.1
P10809_1062
286.4
P10809_1083
284.3
P10809_1097
329.5
Memory CD4 T-cell nTPM: 153.0
Samples: 6
Max nTPM: 198.0
Min nTPM: 115.3
P10809_1014
134.2
P10809_1026
180.0
P10809_1045
198.0
P10809_1064
137.7
P10809_1086
115.3
P10809_1113
152.9
Memory CD8 T-cell nTPM: 130.9
Samples: 5
Max nTPM: 142.3
Min nTPM: 122.0
P10809_1012
128.0
P10809_1027
139.1
P10809_1046
142.3
P10809_1065
122.0
P10809_1111
122.9
Naive CD4 T-cell nTPM: 177.3
Samples: 6
Max nTPM: 343.7
Min nTPM: 85.1
P10809_1015
112.4
P10809_1030
240.1
P10809_1049
343.7
P10809_1068
142.2
P10809_1085
85.1
P10809_1112
140.1
Naive CD8 T-cell nTPM: 133.4
Samples: 6
Max nTPM: 230.5
Min nTPM: 35.3
P10809_1016
104.4
P10809_1031
230.5
P10809_1050
105.0
P10809_1069
138.0
P10809_1087
35.3
P10809_1110
187.2
T-reg nTPM: 188.3
Samples: 6
Max nTPM: 253.2
Min nTPM: 143.0
P10809_1018
143.0
P10809_1037
179.4
P10809_1056
253.2
P10809_1075
158.3
P10809_1094
184.0
P10809_1106
212.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
948.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 299.8
Samples: 4
Max nTPM: 365.4
Min nTPM: 263.4
RHH5202_R3573
263.4
RHH5230_R3602
365.4
RHH5259_R3631
286.3
RHH5288_R3660
284.0
Effector memory CD8 T-cell nTPM: 363.2
Samples: 4
Max nTPM: 542.1
Min nTPM: 222.0
RHH5203_R3574
348.9
RHH5231_R3603
339.9
RHH5260_R3632
222.0
RHH5289_R3661
542.1
MAIT T-cell nTPM: 948.1
Samples: 4
Max nTPM: 1028.5
Min nTPM: 863.7
RHH5233_R3605
1028.5
RHH5205_R3576
1009.2
RHH5262_R3634
863.7
RHH5297_R3663
890.9
Memory CD4 T-cell TFH nTPM: 408.9
Samples: 4
Max nTPM: 583.4
Min nTPM: 278.0
RHH5300_R3666
367.2
RHH5236_R3608
278.0
RHH5265_R3637
583.4
RHH5208_R3579
407.1
Memory CD4 T-cell Th1 nTPM: 462.5
Samples: 4
Max nTPM: 609.3
Min nTPM: 271.4
RHH5210_R3581
271.4
RHH5302_R3668
520.0
RHH5238_R3610
449.4
RHH5267_R3639
609.3
Memory CD4 T-cell Th1/Th17 nTPM: 438.6
Samples: 4
Max nTPM: 724.4
Min nTPM: 279.7
RHH5303_R3669
390.8
RHH5211_R3582
279.7
RHH5239_R3611
724.4
RHH5268_R3640
359.3
Memory CD4 T-cell Th17 nTPM: 486.4
Samples: 4
Max nTPM: 699.9
Min nTPM: 301.0
RHH5304_R3670
533.9
RHH5212_R3583
301.0
RHH5240_R3612
699.9
RHH5269_R3641
410.8
Memory CD4 T-cell Th2 nTPM: 406.3
Samples: 4
Max nTPM: 551.1
Min nTPM: 214.8
RHH5305_R3671
551.1
RHH5213_R3584
214.8
RHH5241_R3613
456.7
RHH5270_R3642
402.5
Naive CD4 T-cell nTPM: 508.1
Samples: 4
Max nTPM: 649.9
Min nTPM: 408.8
RHH5306_R3672
408.8
RHH5214_R3585
447.1
RHH5242_R3614
526.6
RHH5271_R3643
649.9
Naive CD8 T-cell nTPM: 425.3
Samples: 4
Max nTPM: 558.9
Min nTPM: 272.8
RHH5201_R3572
272.8
RHH5229_R3601
558.9
RHH5258_R3630
488.6
RHH5287_R3659
381.0
Non-Vd2 gdTCR nTPM: 77.2
Samples: 4
Max nTPM: 127.8
Min nTPM: 15.2
RHH5235_R3607
105.5
RHH5264_R3636
127.8
RHH5207_R3578
15.2
RHH5299_R3665
60.3
T-reg nTPM: 641.1
Samples: 4
Max nTPM: 942.2
Min nTPM: 339.4
RHH5301_R3667
518.3
RHH5237_R3609
942.2
RHH5266_R3638
764.3
RHH5209_R3580
339.4
Terminal effector memory CD4 T-cell nTPM: 247.9
Samples: 2
Max nTPM: 495.7
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
495.7
Terminal effector memory CD8 T-cell nTPM: 312.2
Samples: 4
Max nTPM: 446.0
Min nTPM: 175.2
RHH5232_R3604
446.0
RHH5204_R3575
175.2
RHH5261_R3633
362.2
RHH5296_R3662
265.3
Vd2 gdTCR nTPM: 173.8
Samples: 4
Max nTPM: 309.5
Min nTPM: 38.4
RHH5234_R3606
190.4
RHH5206_R3577
38.4
RHH5263_R3635
156.7
RHH5298_R3664
309.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.