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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:29.1 nTPM
HPA Brain:67.6 nTPM
GTEx:29.1 nTPM
Pig:21.8 nTPM
Mouse:52.3 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 67.6
2226 Male, age 75, left hemisphere 103.8
1961 Female, age 42, unknown 31.4
Dorsomedial nucleus
nTPM: 27.3
2041 Female, age 72, unknown 44.1
2017 Female, age 42, unknown 27.6
1989 Male, age 62, unknown 10.3
Lateral hypothalamic area
nTPM: 30.5
1791 Male, age 80, right hemisphere 39.4
2271 Male, age 75, both hemispheres 33.5
2228 Male, age 66, unknown 30.4
2412 Male, age 62, unknown 18.7
Mammillary body
nTPM: 25.0
1948 Female, age 72, unknown 30.6
1923 Female, age 72, unknown 30.0
1834 Female, age 42, unknown 24.7
2413 Male, age 66, unknown 23.5
1945 Male, age 80, right hemisphere 16.0
Paraventricular nucleus
nTPM: 28.6
2700 Male, age 62, unknown 28.6
Preoptic area
nTPM: 26.2
1907 Male, age 80, right hemisphere 41.4
2414 Female, age 72, unknown 20.3
1861 Female, age 42, unknown 16.8
Supraoptic nucleus
nTPM: 18.0
2835 Female, age 72, unknown 21.3
1894 Female, age 72, unknown 18.0
2043 Male, age 62, unknown 14.8
Ventromedial nucleus
nTPM: 22.9
1822 Female, age 42, unknown 28.3
1982 Female, age 72, unknown 17.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 29.1
Samples: 257

Max nTPM: 80.4
Min nTPM: 2.8
Std nTPM: 13.6
Median nTPM: 27.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 80.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 77.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 66.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 65.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 62.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 61.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 59.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 58.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 57.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 57.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 56.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 55.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 54.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 54.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 54.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 54.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 54.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 53.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 51.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 50.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 49.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 49.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 47.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 46.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 46.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 46.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 46.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 44.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 44.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 44.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 44.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 42.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 41.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 41.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 41.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 41.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 41.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 40.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 40.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 40.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 40.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 40.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 39.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 39.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 39.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 39.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 39.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 39.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 39.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 39.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 37.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 37.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 37.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 37.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 37.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 37.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 37.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 36.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 36.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 36.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 36.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 36.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 36.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 36.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 35.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 35.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 35.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 35.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 34.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 34.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 34.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 34.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 34.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 34.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 34.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 34.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 34.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 33.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 33.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 33.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 33.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 33.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 33.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 33.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 33.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 33.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 32.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 32.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 32.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 32.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 32.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 32.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 32.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 31.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 31.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 31.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 31.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 31.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 31.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 31.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 31.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 30.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 30.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 30.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 30.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 30.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 30.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 30.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 29.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 29.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 29.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 29.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 29.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 28.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 28.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 28.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 28.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 28.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 28.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 28.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 28.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 27.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 27.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 27.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 27.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 27.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 27.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 27.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 26.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 26.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 26.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 26.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 26.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 26.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 26.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 26.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 26.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 25.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 25.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 25.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 25.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 25.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 25.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 25.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 25.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 25.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 25.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 24.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 24.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 24.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 24.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 24.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 24.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 24.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 24.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 24.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 24.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 24.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 24.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 24.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 24.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 23.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 23.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 23.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 23.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 23.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 23.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 23.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 22.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 22.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 22.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 22.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 22.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 21.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 21.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 21.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 21.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 21.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 21.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 20.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 20.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 20.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 20.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 20.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 20.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 19.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 19.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 19.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 19.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 19.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 18.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 18.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 18.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 18.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 18.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 18.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 18.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 18.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 17.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 17.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 17.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 17.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 17.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 17.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 16.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 16.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 16.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 16.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 15.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 14.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 14.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 14.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 14.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 14.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 14.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 13.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 13.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 13.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 13.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 13.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 13.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 13.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 13.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 12.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 12.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 11.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 11.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 11.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 11.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 10.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 10.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 9.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 9.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 9.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 9.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 9.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 9.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 8.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 8.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 8.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 8.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 7.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 7.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 6.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 6.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 6.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 6.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 4.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 4.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 2.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 21.8
Samples: 4

Max nTPM: 25.8
Min nTPM: 16.1
Sample A Female 24.2
Sample B Female 25.8
Sample C Male 20.9
Sample D Male 16.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 52.3
Samples: 4

Max nTPM: 55.2
Min nTPM: 49.5
Sample A Male 49.5
Sample B Male 53.2
Sample C Female 55.2
Sample D Female 51.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.1
69015422 Antisense, RP_050315_01_A01, Mouse strain C57BL/6J (56 days, male) 5.1

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