HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1757.0 nTPM
HPA Brain:221.1 nTPM
GTEx:1757.0 nTPM
FANTOM5:90.8 Scaled Tags Per Million
Mouse:1430.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004107
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 221.1
Sample id Sample description nTPM
Hippocampus
nTPM: 211.3
1898 Male, age 80, left hemisphere 299.1
2529 Female, age 94, left hemisphere 230.5
1911 Female, age 85, right hemisphere 226.2
2148 Female, age 91, left hemisphere 178.1
2621 Female, age 67, right hemisphere 173.6
1855 Male, age 76, left hemisphere 160.4
Dentate gyrus
nTPM: 210.0
2010 Male, age 76, both hemispheres 282.1
2530 Female, age 94, left hemisphere 250.0
2531 Female, age 67, both hemispheres 204.4
1927 Female, age 91, both hemispheres 190.9
2246 Female, age 85, both hemispheres 170.5
2528 Male, age 74, both hemispheres 162.2
Entorhinal gyrus
nTPM: 190.7
2117 Female, age 91, right hemisphere 240.3
2686 Male, age 75, right hemisphere 230.4
1787 Male, age 76, left hemisphere 188.4
2764 Male, age 80, right hemisphere 187.9
1938 Female, age 85, left hemisphere 169.6
2613 Female, age 94, left hemisphere 127.5
Hippocampus, CA1
nTPM: 209.1
2749 Male, age 80, left hemisphere 223.8
2082 Female, age 91, right hemisphere 221.0
2045 Male, age 76, both hemispheres 212.9
1873 Female, age 85, both hemispheres 204.6
2527 Male, age 74, both hemispheres 183.3
Hippocampus, CA2
nTPM: 221.1
1963 Male, age 80, left hemisphere 298.8
1892 Male, age 76, both hemispheres 235.1
2113 Female, age 91, right hemisphere 221.5
2437 Female, age 94, left hemisphere 198.3
2249 Male, age 74, both hemispheres 197.2
1940 Female, age 85, left hemisphere 175.5
Hippocampus, CA3
nTPM: 191.4
1867 Male, age 76, both hemispheres 293.9
1891 Female, age 85, both hemispheres 250.9
2137 Male, age 80, left hemisphere 184.0
2861 Female, age 67, both hemispheres 160.3
2436 Male, age 74, both hemispheres 132.7
2620 Female, age 94, left hemisphere 126.9
Parahippocampal cortex
nTPM: 184.1
2018 Male, age 76, both hemispheres 341.5
1990 Female, age 91, right hemisphere 214.6
2250 Female, age 67, right hemisphere 208.1
1850 Male, age 80, both hemispheres 177.2
1933 Female, age 85, both hemispheres 175.2
2245 Female, age 91, both hemispheres 157.9
2692 Male, age 74, both hemispheres 155.6
2532 Female, age 72, left hemisphere 153.9
2693 Female, age 94, both hemispheres 134.7
2622 Female, age 67, right hemisphere 122.2
Perirhinal gyrus
nTPM: 190.2
1841 Female, age 85, right hemisphere 227.3
1847 Female, age 91, left hemisphere 197.0
1794 Male, age 80, right hemisphere 186.9
2848 Male, age 76, right hemisphere 183.6
2521 Female, age 94, right hemisphere 156.2
Subiculum
nTPM: 209.7
1977 Female, age 85, both hemispheres 289.7
2042 Male, age 76, both hemispheres 261.7
1901 Male, age 80, both hemispheres 218.8
2729 Female, age 91, right hemisphere 195.6
2438 Female, age 94, left hemisphere 151.1
2619 Male, age 74, both hemispheres 141.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1757.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1757.0
Samples: 255

Max nTPM: 5512.0
Min nTPM: 538.2
Std nTPM: 762.5
Median nTPM: 1564.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 5512.0
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 4912.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 4470.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 4384.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 4157.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 4123.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 4042.8
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 3925.7
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 3518.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 3338.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 3287.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 90.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.8
FF:10169-103B7 60 years, female 101.7
FF:10153-102I9 76 years, female 79.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1430.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1430.2
Samples: 4

Max nTPM: 1512.6
Min nTPM: 1364.1
Sample A Male 1455.8
Sample B Male 1388.1
Sample C Female 1512.6
Sample D Female 1364.1
Hippocampal formation
nTPM: 1365.7
Samples: 4

Max nTPM: 1558.7
Min nTPM: 1253.4
Sample A Male 1558.7
Sample B Male 1311.7
Sample C Female 1339.0
Sample D Female 1253.4

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo