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RPS29
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  • RPS29
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2135.1 nTPM
HPA Brain:462.8 nTPM
GTEx:2135.1 nTPM
FANTOM5:127.6 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

462.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 286.5
1981 Female, age 72, midline 424.7
2565 Male, age 75, midline 350.0
2048 Male, age 55, midline 264.1
2816 Male, age 47, midline 213.5
2194 Female, age 79, both hemispheres 180.3
Cervical spinal cord, dorsal horn
nTPM: 349.5
2173 Female, age 72, unknown 470.9
2069 Male, age 47, both hemispheres 469.0
2296 Male, age 66, both hemispheres 397.9
1877 Male, age 55, unknown 375.9
2297 Male, age 75, both hemispheres 205.7
2721 Male, age 90, both hemispheres 177.5
Cervical spinal cord, ventral horn
nTPM: 462.8
2480 Male, age 75, both hemispheres 731.8
2098 Female, age 72, unknown 601.5
2809 Male, age 90, both hemispheres 558.1
2068 Male, age 55, unknown 457.9
2295 Male, age 66, both hemispheres 284.6
2820 Female, age 79, both hemispheres 142.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2135.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 2135.1
Samples: 204

Max nTPM: 6173.8
Min nTPM: 844.4
Std nTPM: 779.3
Median nTPM: 1946.3
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 6173.8
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 4159.4
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 3894.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 3871.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 3855.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 3815.4
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 3624.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 3620.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 3605.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3604.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 3557.3
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 3484.2
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 3414.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 3405.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 3402.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 3358.7
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 3320.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 3320.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 3301.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 3283.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 3272.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 3218.7
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 3185.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 3122.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 3103.7
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 3092.4
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 3082.6
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 3072.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 3066.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 3039.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 3038.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 3016.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2969.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2937.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2926.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 2839.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2838.9
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 2831.4
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 2829.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2808.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 2801.7
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 2763.3
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2751.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 2735.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2724.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 2715.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2711.7
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 2692.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 2683.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2673.0
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 2645.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2633.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2624.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2587.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2549.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 2548.4
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2547.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2510.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2506.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 2499.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2477.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 2477.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 2463.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 2459.0
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 2448.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 2438.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 2437.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 2412.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2405.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2341.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2307.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2299.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2284.0
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 2261.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2251.7
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 2250.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 2235.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 2225.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 2212.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 2203.3
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 2187.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2170.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2129.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 2121.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2115.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2111.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 2088.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2055.3
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 2053.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2037.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 2033.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 2032.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2021.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 2013.7
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 2007.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1996.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1978.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1978.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1971.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1967.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1963.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1950.9
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1941.6
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1917.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1917.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1906.2
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1905.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1885.8
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 1883.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1878.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1877.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1868.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1866.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1865.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1864.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1846.3
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1843.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1835.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1829.0
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1818.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1804.9
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1797.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1795.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1791.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1789.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1783.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1782.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1779.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1773.6
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1771.1
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1770.2
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1767.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1767.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1757.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1753.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1748.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1743.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1740.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1735.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1724.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1724.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1684.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1681.6
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1678.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1676.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1645.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1641.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1618.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1598.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 1588.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1585.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1582.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1568.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1549.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1533.1
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1532.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1525.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1516.3
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 1512.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1505.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1489.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1485.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1464.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1461.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1453.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1443.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1441.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1407.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1399.8
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 1387.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1381.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1360.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1357.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1337.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1336.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1333.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1313.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1300.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1298.7
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 1295.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1282.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1281.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1262.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1257.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1255.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1239.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1203.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1201.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1196.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1183.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1180.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1170.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1169.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1161.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1159.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1145.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1120.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1116.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1072.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1065.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1050.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 997.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 982.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 844.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

127.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 127.6
FF:10181-103D1 60 years, female 183.0
FF:10159-103A6 76 years, female 72.1

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