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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • EVOLUTION

  • FIS1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:95.3 nTPM
GTEx:212.6 nTPM
FANTOM5:108.3 Scaled Tags Per Million
Pig:272.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.3
Sample id Sample description nTPM
Putamen
nTPM: 95.3
2647 Male, age 75, left hemisphere 117.3
2482 Female, age 94, left hemisphere 109.4
2466 Female, age 79, unknown 102.3
1937 Female, age 91, right hemisphere 90.9
2489 Female, age 72, unknown 85.5
1838 Male, age 80, right hemisphere 83.8
1829 Male, age 74, unknown 78.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 212.6
Samples: 254

Max nTPM: 534.9
Min nTPM: 102.6
Std nTPM: 48.9
Median nTPM: 204.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 534.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 394.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 380.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 371.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 366.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 361.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 345.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 345.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 329.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 322.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 313.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 304.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 302.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 299.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 294.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 282.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 281.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 278.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 277.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 277.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 276.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 268.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 265.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 261.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 260.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 259.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 259.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 259.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 257.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 255.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 254.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 254.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 253.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 253.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 252.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 250.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 250.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 249.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 249.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 248.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 248.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 248.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 248.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 247.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 246.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 246.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 245.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 245.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 244.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 242.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 239.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 239.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 239.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 238.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 237.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 237.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 236.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 236.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 236.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 235.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 234.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 234.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 233.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 232.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 230.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 230.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 230.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 230.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 230.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 229.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 229.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 228.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 226.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 226.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 225.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 223.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 223.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 222.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 222.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 221.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 221.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 221.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 221.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 220.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 219.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 219.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 217.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 217.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 217.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 217.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 217.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 216.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 216.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 216.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 216.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 215.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 215.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 214.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 214.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 214.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 214.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 213.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 213.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 212.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 212.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 212.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 212.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 212.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 211.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 211.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 211.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 211.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 210.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 210.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 210.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 210.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 209.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 209.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 208.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 208.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 207.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 207.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 207.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 207.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 205.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 205.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 204.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 204.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 203.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 203.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 203.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 203.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 203.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 202.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 202.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 201.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 200.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 200.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 200.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 200.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 199.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 199.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 199.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 198.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 198.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 198.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 197.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 197.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 197.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 197.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 196.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 196.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 196.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 196.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 195.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 195.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 195.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 194.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 194.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 193.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 193.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 193.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 191.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 191.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 190.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 190.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 190.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 190.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 189.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 189.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 189.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 188.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 188.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 187.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 187.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 187.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 187.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 186.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 186.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 186.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 186.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 185.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 184.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 184.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 183.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 183.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 183.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 182.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 182.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 182.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 181.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 181.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 181.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 180.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 180.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 180.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 180.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 179.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 179.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 178.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 178.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 178.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 177.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 177.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 177.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 176.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 176.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 176.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 176.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 175.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 175.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 175.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 175.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 174.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 172.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 172.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 170.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 169.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 169.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 169.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 169.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 168.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 167.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 167.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 166.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 165.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 165.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 165.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 165.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 164.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 164.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 164.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 161.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 161.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 159.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 159.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 159.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 159.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 159.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 159.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 158.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 158.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 156.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 156.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 156.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 155.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 152.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 152.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 150.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 132.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 131.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 126.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 119.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 102.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

108.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 108.3
FF:10176-103C5 60 years, female 108.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.4
Pig sample Sample description nTPM
Putamen
nTPM: 272.4
Samples: 3

Max nTPM: 332.5
Min nTPM: 207.0
Sample B Female 207.0
Sample C Male 332.5
Sample D Male 277.8

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