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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • VAMP2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:304.0 nTPM
GTEx:221.0 nTPM
FANTOM5:1310.4 Scaled Tags Per Million
Macaque:425.5 nTPM
Pig:526.2 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.0
Sample id Sample description nTPM
Putamen
nTPM: 304.0
1829 Male, age 74, unknown 364.6
1937 Female, age 91, right hemisphere 338.9
2466 Female, age 79, unknown 323.3
2647 Male, age 75, left hemisphere 313.3
1838 Male, age 80, right hemisphere 312.5
2482 Female, age 94, left hemisphere 248.9
2489 Female, age 72, unknown 226.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

221.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 221.0
Samples: 254

Max nTPM: 441.9
Min nTPM: 109.7
Std nTPM: 56.5
Median nTPM: 214.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 441.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 401.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 398.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 371.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 357.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 356.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 353.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 347.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 330.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 327.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 326.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 317.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 317.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 316.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 312.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 311.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 309.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 304.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 299.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 299.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 299.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 299.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 298.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 297.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 297.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 296.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 293.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 290.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 290.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 289.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 289.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 289.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 283.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 283.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 281.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 280.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 279.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 279.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 279.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 279.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 277.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 277.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 274.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 274.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 273.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 273.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 273.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 271.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 271.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 270.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 268.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 266.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 265.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 265.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 264.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 263.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 263.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 261.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 261.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 260.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 259.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 259.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 259.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 258.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 257.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 257.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 256.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 255.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 255.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 254.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 254.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 253.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 251.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 248.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 247.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 247.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 247.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 247.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 247.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 244.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 242.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 242.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 241.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 241.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 241.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 240.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 240.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 240.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 239.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 238.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 235.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 235.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 233.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 233.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 232.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 232.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 231.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 229.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 229.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 228.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 228.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 228.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 227.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 227.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 226.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 226.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 226.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 226.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 226.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 225.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 224.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 224.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 224.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 224.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 223.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 223.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 221.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 220.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 219.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 219.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 219.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 218.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 217.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 217.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 216.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 216.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 214.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 214.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 214.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 214.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 214.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 213.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 212.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 210.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 210.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 210.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 208.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 208.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 207.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 206.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 206.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 204.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 204.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 204.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 204.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 203.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 203.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 203.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 202.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 202.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 201.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 200.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 200.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 199.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 198.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 197.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 196.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 196.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 196.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 195.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 195.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 195.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 194.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 194.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 193.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 193.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 192.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 192.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 191.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 191.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 191.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 190.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 190.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 190.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 189.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 189.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 188.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 187.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 187.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 185.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 184.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 184.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 183.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 183.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 183.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 183.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 182.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 181.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 181.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 180.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 180.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 179.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 179.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 179.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 178.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 177.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 176.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 176.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 176.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 175.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 175.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 173.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 172.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 172.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 170.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 170.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 169.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 169.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 169.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 166.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 165.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 164.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 164.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 163.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 160.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 158.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 158.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 157.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 157.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 156.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 156.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 155.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 154.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 154.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 154.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 154.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 154.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 153.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 152.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 150.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 150.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 149.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 149.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 148.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 148.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 147.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 146.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 142.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 142.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 141.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 141.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 140.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 140.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 138.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 137.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 137.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 134.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 134.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 129.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 128.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 126.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 124.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 124.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 109.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1310.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1310.4
FF:10176-103C5 60 years, female 1310.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

425.5
Macaque sample Sample description nTPM
Putamen
nTPM: 425.6
Samples: 2

Max nTPM: 467.3
Min nTPM: 383.8
Sample A 383.8
Sample B 467.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

526.2
Pig sample Sample description nTPM
Putamen
nTPM: 526.2
Samples: 3

Max nTPM: 577.3
Min nTPM: 456.5
Sample B Female 456.5
Sample C Male 577.3
Sample D Male 544.7

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