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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • MIF
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:260.6 nTPM
GTEx:667.6 nTPM
FANTOM5:583.0 Scaled Tags Per Million
Macaque:225.4 nTPM
Pig:589.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

260.6
Sample id Sample description nTPM
Putamen
nTPM: 260.6
2482 Female, age 94, left hemisphere 360.8
1937 Female, age 91, right hemisphere 335.3
2466 Female, age 79, unknown 329.7
1838 Male, age 80, right hemisphere 234.9
1829 Male, age 74, unknown 198.7
2647 Male, age 75, left hemisphere 183.7
2489 Female, age 72, unknown 181.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

667.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 667.6
Samples: 254

Max nTPM: 1379.2
Min nTPM: 225.3
Std nTPM: 186.2
Median nTPM: 657.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1379.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1348.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1246.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1207.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1182.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1094.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1065.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1057.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1056.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1054.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1022.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 986.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 982.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 980.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 968.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 966.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 947.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 946.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 939.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 939.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 925.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 919.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 918.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 907.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 907.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 897.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 896.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 888.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 883.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 881.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 876.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 876.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 874.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 866.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 865.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 865.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 865.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 859.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 856.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 856.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 843.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 839.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 830.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 821.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 819.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 814.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 812.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 806.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 804.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 803.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 800.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 795.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 794.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 793.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 792.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 786.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 786.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 783.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 782.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 780.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 778.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 776.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 768.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 767.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 767.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 766.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 763.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 761.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 760.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 757.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 757.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 756.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 756.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 756.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 754.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 751.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 743.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 743.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 740.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 740.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 739.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 736.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 729.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 729.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 727.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 727.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 724.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 722.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 722.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 721.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 720.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 717.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 713.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 713.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 713.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 712.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 710.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 710.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 706.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 706.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 706.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 705.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 704.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 702.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 699.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 694.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 688.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 687.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 686.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 685.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 681.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 681.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 681.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 680.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 679.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 679.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 678.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 677.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 676.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 673.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 669.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 667.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 666.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 665.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 662.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 660.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 660.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 655.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 653.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 651.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 651.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 649.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 647.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 646.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 645.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 644.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 640.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 629.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 628.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 628.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 626.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 626.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 625.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 623.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 622.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 620.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 617.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 617.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 614.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 613.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 611.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 611.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 609.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 607.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 601.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 599.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 599.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 597.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 597.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 596.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 595.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 594.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 591.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 591.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 589.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 588.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 585.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 584.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 582.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 582.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 581.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 580.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 574.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 571.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 571.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 562.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 552.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 552.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 551.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 546.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 546.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 545.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 544.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 543.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 543.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 543.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 541.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 539.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 537.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 536.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 534.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 533.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 532.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 531.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 531.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 530.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 530.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 530.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 513.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 509.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 507.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 507.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 506.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 503.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 501.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 501.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 501.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 500.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 498.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 494.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 493.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 493.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 491.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 489.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 488.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 487.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 483.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 483.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 478.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 476.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 475.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 461.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 460.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 457.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 456.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 454.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 454.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 452.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 450.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 450.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 450.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 430.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 425.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 418.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 417.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 412.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 410.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 408.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 408.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 405.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 399.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 398.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 389.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 388.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 384.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 378.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 369.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 367.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 355.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 350.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 344.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 319.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 268.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 225.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

583.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 583.0
FF:10176-103C5 60 years, female 583.0

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.4
Macaque sample Sample description nTPM
Putamen
nTPM: 225.4
Samples: 2

Max nTPM: 270.4
Min nTPM: 180.4
Sample A 180.4
Sample B 270.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

589.6
Pig sample Sample description nTPM
Putamen
nTPM: 589.6
Samples: 3

Max nTPM: 743.0
Min nTPM: 469.9
Sample B Female 469.9
Sample C Male 743.0
Sample D Male 556.0

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