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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • MIF
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1022.3 nTPM
HPA Brain:707.0 nTPM
GTEx:1022.3 nTPM
FANTOM5:1110.1 Scaled Tags Per Million
Macaque:368.9 nTPM
Mouse:307.6 nTPM
Pig:512.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 72980
Sample Intensity
Spinal cord_01
112912
Spinal cord_02
87153
Spinal cord_03
71162
Spinal cord_04
74799
Spinal cord_05
77656
Spinal cord_06
61101
Spinal cord_07
60830
Spinal cord_08
62077

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

707.0
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 528.0
2193 Male, age 75, both hemispheres 808.3
2819 Male, age 47, both hemispheres 536.5
2734 Male, age 80, both hemispheres 396.6
2818 Female, age 79, both hemispheres 370.3
Cervical spinal cord, central gray
nTPM: 375.8
1981 Female, age 72, midline 511.2
2565 Male, age 75, midline 416.9
2194 Female, age 79, both hemispheres 392.7
2816 Male, age 47, midline 354.8
2048 Male, age 55, midline 203.4
Cervical spinal cord, dorsal horn
nTPM: 454.7
2296 Male, age 66, both hemispheres 615.1
2173 Female, age 72, unknown 531.7
2069 Male, age 47, both hemispheres 511.4
2721 Male, age 90, both hemispheres 411.5
2297 Male, age 75, both hemispheres 345.4
1877 Male, age 55, unknown 313.2
Cervical spinal cord, ventral horn
nTPM: 403.8
2480 Male, age 75, both hemispheres 511.4
2098 Female, age 72, unknown 464.3
2809 Male, age 90, both hemispheres 403.4
2068 Male, age 55, unknown 386.5
2295 Male, age 66, both hemispheres 348.0
2820 Female, age 79, both hemispheres 309.0
Dorsal funiculus (white matter)
nTPM: 574.2
2128 Male, age 75, both hemispheres 956.8
2810 Male, age 90, both hemispheres 523.6
2812 Male, age 66, both hemispheres 477.4
2064 Female, age 79, both hemispheres 462.4
2817 Male, age 47, both hemispheres 450.7
Lateral funiculus (white matter)
nTPM: 707.0
2192 Male, age 75, both hemispheres 903.4
2099 Male, age 90, both hemispheres 768.0
2294 Male, age 66, both hemispheres 653.1
2094 Female, age 79, both hemispheres 503.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1022.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1022.3
Samples: 204

Max nTPM: 3159.6
Min nTPM: 340.1
Std nTPM: 416.0
Median nTPM: 951.4
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 3159.6
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2499.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 2299.4
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 2281.3
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2207.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1954.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 1943.8
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 1917.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1850.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1837.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1743.0
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1738.1
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1677.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1666.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1650.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1642.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1626.7
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1592.2
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1582.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1576.9
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1554.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1554.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1528.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1522.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1521.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1519.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1518.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1481.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1472.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1469.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1456.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1393.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1379.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1348.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1342.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1333.7
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1331.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1316.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1295.3
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1295.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1294.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1288.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1284.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1271.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1264.3
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1260.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1254.6
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1248.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1244.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1242.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1241.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1206.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1202.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1201.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1192.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1179.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1176.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1175.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1164.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1160.6
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1158.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1157.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1153.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1144.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1143.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1132.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1124.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1123.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1119.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1114.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1101.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1094.3
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1065.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1062.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1061.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1058.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1048.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1038.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1034.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1032.3
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1030.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1024.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1023.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1014.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1010.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1008.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1005.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1004.1
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 997.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 997.0
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 993.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 990.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 989.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 981.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 975.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 970.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 964.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 961.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 958.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 952.5
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 952.4
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 951.6
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 951.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 948.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 935.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 928.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 927.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 926.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 926.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 920.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 918.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 911.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 909.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 899.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 892.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 879.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 870.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 862.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 859.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 846.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 844.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 844.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 842.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 842.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 841.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 837.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 834.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 827.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 825.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 821.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 815.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 814.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 813.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 811.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 811.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 809.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 804.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 802.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 799.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 794.2
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 790.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 774.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 761.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 757.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 756.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 755.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 752.2
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 747.5
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 742.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 735.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 734.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 734.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 734.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 733.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 720.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 712.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 710.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 709.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 702.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 701.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 699.4
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 694.1
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 688.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 688.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 684.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 682.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 681.4
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 680.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 666.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 651.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 641.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 636.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 633.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 633.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 630.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 627.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 625.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 623.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 621.4
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 618.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 616.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 614.3
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 604.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 597.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 593.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 586.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 570.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 570.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 569.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 567.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 546.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 537.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 528.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 526.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 523.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 518.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 513.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 493.2
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 486.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 460.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 426.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 400.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 371.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 340.1
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1110.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1110.1
FF:10181-103D1 60 years, female 1888.3
FF:10159-103A6 76 years, female 331.8

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

368.9
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 238.6
Samples: 2

Max nTPM: 333.1
Min nTPM: 144.0
Sample A 144.0
Sample B 333.1
Ventral spinal cord
nTPM: 368.9
Samples: 1

Max nTPM: 368.9
Min nTPM: 368.9
Sample A 368.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

512.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 425.7
Samples: 4

Max nTPM: 473.3
Min nTPM: 379.2
Sample A Female 421.8
Sample B Female 379.2
Sample C Male 473.3
Sample D Male 428.6
Ventral spinal cord
nTPM: 512.3
Samples: 4

Max nTPM: 607.7
Min nTPM: 389.2
Sample A Female 474.9
Sample B Female 577.5
Sample C Male 607.7
Sample D Male 389.2

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

307.6
Mouse sample Sample description nTPM
Spinal cord
nTPM: 307.6
Samples: 4

Max nTPM: 337.1
Min nTPM: 277.9
Sample A 277.9
Sample B 337.1
Sample C 303.7
Sample D 311.7

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