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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
525.2
nTPM
HPA Brain:
224.6
nTPM
GTEx:
525.2
nTPM
FANTOM5:
86.3
Scaled Tags Per Million
Pig:
91.9
nTPM
Mouse:
266.0
nTPM
Allen mouse:
1.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
224.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 172.0
2019
Male, age 18, unknown
199.1
1827
Male, age 72, unknown
195.4
2219
Male, age 76, both hemispheres
176.6
2828
Female, age 72, unknown
175.2
1870
Female, age 42, unknown
173.5
2586
Male, age 75, left hemisphere
171.9
1833
Male, age 53, unknown
160.3
2666
Male, age 74, left hemisphere
157.9
1830
Male, age 51, unknown
155.5
2411
Female, age 72, unknown
154.2
Dorsal raphe nucleus nTPM: 185.7
2298
Female, age 72, unknown
210.6
1828
Male, age 53, unknown
210.0
2047
Male, age 72, unknown
193.6
2750
Male, age 76, both hemispheres
169.7
2016
Female, age 72, unknown
144.6
Inferior colliculus nTPM: 190.9
2097
Female, age 72, unknown
199.6
1890
Male, age 53, unknown
195.9
1848
Female, age 42, unknown
191.1
2849
Male, age 72, unknown
177.1
Median raphe nucleus nTPM: 196.2
2220
Male, age 76, midline
196.2
Periaquaductal grey, anterior nTPM: 184.8
1947
Male, age 18, unknown
198.6
1795
Male, age 51, unknown
197.2
2502
Female, age 75, unknown
158.6
Periaquaductal grey, dorsal nTPM: 170.7
2850
Male, age 76, both hemispheres
210.4
1840
Male, age 53, unknown
165.5
1831
Male, age 72, unknown
154.8
2464
Female, age 72, unknown
152.1
Periaquaductal grey, lateral nTPM: 174.7
2272
Male, age 74, both hemispheres
187.5
2053
Male, age 18, unknown
179.4
2140
Male, age 76, both hemispheres
157.0
Pretectal area nTPM: 224.6
1817
Female, age 42, unknown
286.2
1816
Male, age 51, unknown
275.3
2007
Male, age 72, unknown
273.3
2667
Female, age 75, unknown
257.7
1944
Female, age 72, unknown
254.3
1815
Male, age 53, unknown
230.9
2224
Female, age 72, unknown
204.1
2273
Male, age 74, both hemispheres
187.9
2407
Male, age 75, both hemispheres
176.8
2825
Male, age 18, unknown
172.4
2316
Male, age 76, right hemisphere
151.6
Red nucleus nTPM: 181.6
1821
Female, age 72, unknown
256.2
2725
Female, age 75, unknown
213.5
2823
Male, age 76, right hemisphere
204.3
2503
Female, age 72, unknown
187.2
2785
Male, age 18, unknown
184.5
1865
Male, age 51, unknown
174.2
2227
Male, age 72, unknown
170.2
1954
Female, age 42, unknown
167.1
2769
Male, age 72, unknown
166.7
1904
Male, age 53, unknown
156.6
2584
Male, age 75, left hemisphere
149.9
2588
Male, age 74, left hemisphere
148.1
Substantia nigra nTPM: 211.8
1916
Female, age 42, unknown
274.0
1889
Female, age 72, unknown
244.0
1851
Male, age 51, unknown
227.1
1941
Male, age 53, unknown
218.8
2409
Female, age 72, unknown
214.6
2241
Male, age 72, unknown
212.0
2665
Male, age 74, both hemispheres
209.5
2699
Male, age 18, unknown
200.2
2590
Female, age 75, unknown
164.1
2583
Male, age 75, right hemisphere
153.3
Superior colliculus nTPM: 183.9
2587
Male, age 74, left hemisphere
216.6
2087
Female, age 72, unknown
207.1
1796
Male, age 53, unknown
200.1
2668
Female, age 75, unknown
193.4
1895
Male, age 76, right hemisphere
192.0
2261
Male, age 18, unknown
182.9
1839
Male, age 51, unknown
172.2
1913
Female, age 42, unknown
163.5
1995
Male, age 72, unknown
161.0
2664
Male, age 75, both hemispheres
150.6
Ventral tegmental area nTPM: 190.9
2218
Male, age 76, both hemispheres
224.9
1915
Female, age 42, unknown
213.4
2410
Female, age 72, unknown
201.1
2223
Female, age 72, unknown
182.4
2021
Male, age 53, unknown
167.7
1942
Male, age 51, unknown
156.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
525.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 525.2
Samples: 139
Max nTPM: 932.0
Min nTPM: 226.4
Std nTPM: 135.3
Median nTPM: 505.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
932.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
920.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
879.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
851.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
825.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
811.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
792.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
792.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
779.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
774.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
746.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
740.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
727.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
708.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
702.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
699.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
695.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
695.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
686.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
669.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
662.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
651.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
649.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
641.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
637.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
636.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
629.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
629.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
627.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
613.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
613.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
612.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
603.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
602.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
597.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
596.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
588.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
584.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
582.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
576.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
576.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
571.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
570.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
570.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
563.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
559.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
557.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
555.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
554.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
550.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
550.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
549.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
547.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
546.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
542.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
538.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
536.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
536.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
533.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
530.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
521.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
520.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
516.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
510.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
509.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
508.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
508.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
507.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
507.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
505.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
505.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
504.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
503.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
501.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
497.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
497.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
492.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
490.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
488.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
488.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
482.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
481.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
480.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
475.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
474.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
473.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
473.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
473.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
471.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
470.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
470.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
469.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
464.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
462.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
461.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
461.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
451.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
449.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
446.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
444.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
436.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
434.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
433.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
429.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
428.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
425.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
421.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
418.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
417.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
413.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
412.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
410.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
409.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
409.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
409.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
406.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
405.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
402.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
400.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
396.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
395.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
390.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
389.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
387.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
383.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
380.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
374.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
351.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
350.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
346.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
343.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
337.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
327.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
321.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
316.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
289.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
287.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
251.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
226.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
266.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 266.0
Samples: 4
Max nTPM: 294.7
Min nTPM: 238.5
Sample A
Male
294.7
Sample B
Male
247.2
Sample C
Female
238.5
Sample D
Female
283.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.