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  • TISSUE

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  • ATP5PO
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:277.7 nTPM
HPA Brain:198.2 nTPM
GTEx:277.7 nTPM
Pig:2.8 nTPM
Mouse:460.8 nTPM
Allen mouse:15.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 103.8
2226 Male, age 75, left hemisphere 123.9
1961 Female, age 42, unknown 83.7
Dorsomedial nucleus
nTPM: 105.2
1989 Male, age 62, unknown 119.0
2041 Female, age 72, unknown 106.1
2017 Female, age 42, unknown 90.6
Lateral hypothalamic area
nTPM: 138.9
2228 Male, age 66, unknown 161.9
1791 Male, age 80, right hemisphere 155.2
2271 Male, age 75, both hemispheres 139.2
2412 Male, age 62, unknown 99.3
Mammillary body
nTPM: 198.2
1923 Female, age 72, unknown 341.7
1948 Female, age 72, unknown 177.7
1834 Female, age 42, unknown 164.9
2413 Male, age 66, unknown 162.3
1945 Male, age 80, right hemisphere 144.1
Paraventricular nucleus
nTPM: 104.6
2700 Male, age 62, unknown 104.6
Preoptic area
nTPM: 117.8
1907 Male, age 80, right hemisphere 137.3
1861 Female, age 42, unknown 120.4
2414 Female, age 72, unknown 95.8
Supraoptic nucleus
nTPM: 127.6
1894 Female, age 72, unknown 146.1
2835 Female, age 72, unknown 121.9
2043 Male, age 62, unknown 114.8
Ventromedial nucleus
nTPM: 102.9
1982 Female, age 72, unknown 113.7
1822 Female, age 42, unknown 92.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 277.7
Samples: 257

Max nTPM: 635.3
Min nTPM: 137.0
Std nTPM: 78.3
Median nTPM: 263.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 635.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 541.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 539.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 518.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 517.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 515.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 511.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 494.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 492.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 490.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 456.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 454.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 444.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 443.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 434.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 433.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 416.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 412.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 411.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 410.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 409.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 386.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 386.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 385.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 379.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 373.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 363.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 359.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 355.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 354.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 352.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 352.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 349.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 348.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 344.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 340.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 339.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 337.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 336.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 335.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 335.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 333.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 332.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 332.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 331.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 331.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 330.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 329.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 327.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 327.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 325.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 325.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 325.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 324.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 324.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 322.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 320.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 319.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 319.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 319.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 318.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 316.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 315.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 314.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 313.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 312.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 312.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 311.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 311.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 310.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 309.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 307.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 305.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 304.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 304.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 302.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 301.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 300.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 296.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 296.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 296.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 295.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 292.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 292.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 291.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 288.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 287.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 287.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 286.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 285.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 285.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 284.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 284.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 283.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 281.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 281.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 280.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 279.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 278.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 278.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 277.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 277.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 277.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 277.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 274.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 274.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 274.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 273.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 272.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 272.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 271.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 271.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 271.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 270.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 270.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 268.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 268.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 267.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 267.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 267.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 266.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 266.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 266.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 265.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 265.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 264.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 264.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 264.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 263.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 263.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 263.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 261.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 261.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 261.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 260.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 260.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 260.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 260.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 259.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 257.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 257.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 256.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 255.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 254.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 253.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 252.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 252.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 252.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 252.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 251.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 251.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 250.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 250.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 249.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 249.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 248.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 248.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 247.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 246.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 245.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 245.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 245.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 244.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 244.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 242.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 242.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 241.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 241.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 240.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 240.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 239.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 238.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 238.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 237.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 237.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 235.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 234.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 233.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 233.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 231.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 231.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 230.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 229.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 229.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 228.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 228.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 226.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 225.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 223.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 223.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 222.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 222.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 222.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 222.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 221.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 220.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 218.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 216.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 216.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 215.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 215.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 213.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 213.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 213.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 212.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 212.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 212.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 212.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 211.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 211.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 211.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 210.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 210.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 210.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 210.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 209.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 209.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 207.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 207.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 207.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 205.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 205.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 204.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 203.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 202.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 201.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 198.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 195.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 195.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 195.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 194.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 194.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 194.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 194.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 192.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 191.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 191.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 191.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 190.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 190.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 189.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 189.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 188.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 188.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 188.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 187.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 187.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 187.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 185.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 185.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 179.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 178.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 178.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 175.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 175.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 148.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 137.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2.8
Samples: 4

Max nTPM: 4.0
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 3.0
Sample C Male 3.4
Sample D Male 4.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

460.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 460.8
Samples: 4

Max nTPM: 508.4
Min nTPM: 407.2
Sample A Male 407.2
Sample B Male 508.4
Sample C Female 459.9
Sample D Female 467.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.8
576416 Antisense, RP_040826_01_G02, Mouse strain C57BL/6J (56 days, male) 17.6
1159 Antisense, RP_Baylor_253881, Mouse strain C57BL/6J (56 days, male) 14.0
1158 Antisense, RP_Baylor_253881, Mouse strain C57BL/6J (56 days, male) 7.6

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