We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
254.1
nTPM
HPA Brain:
144.6
nTPM
GTEx:
254.1
nTPM
FANTOM5:
110.1
Scaled Tags Per Million
Pig:
4.9
nTPM
Mouse:
540.8
nTPM
Allen mouse:
14.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
144.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 110.5
2019
Male, age 18, unknown
140.8
2411
Female, age 72, unknown
134.5
1827
Male, age 72, unknown
124.4
1870
Female, age 42, unknown
109.3
1833
Male, age 53, unknown
107.5
2219
Male, age 76, both hemispheres
106.4
1830
Male, age 51, unknown
101.1
2666
Male, age 74, left hemisphere
98.3
2828
Female, age 72, unknown
96.4
2586
Male, age 75, left hemisphere
86.5
Dorsal raphe nucleus nTPM: 128.2
2298
Female, age 72, unknown
157.4
1828
Male, age 53, unknown
142.5
2047
Male, age 72, unknown
132.1
2016
Female, age 72, unknown
105.5
2750
Male, age 76, both hemispheres
103.9
Inferior colliculus nTPM: 120.2
2097
Female, age 72, unknown
139.2
1890
Male, age 53, unknown
126.5
1848
Female, age 42, unknown
117.0
2849
Male, age 72, unknown
98.3
Median raphe nucleus nTPM: 96.9
2220
Male, age 76, midline
96.9
Periaquaductal grey, anterior nTPM: 113.1
1947
Male, age 18, unknown
120.5
2502
Female, age 75, unknown
113.2
1795
Male, age 51, unknown
105.5
Periaquaductal grey, dorsal nTPM: 96.5
1840
Male, age 53, unknown
101.3
2464
Female, age 72, unknown
97.8
1831
Male, age 72, unknown
94.7
2850
Male, age 76, both hemispheres
92.2
Periaquaductal grey, lateral nTPM: 97.2
2272
Male, age 74, both hemispheres
111.1
2053
Male, age 18, unknown
98.3
2140
Male, age 76, both hemispheres
82.0
Pretectal area nTPM: 123.0
1817
Female, age 42, unknown
154.0
2007
Male, age 72, unknown
149.7
1816
Male, age 51, unknown
145.1
1944
Female, age 72, unknown
140.7
1815
Male, age 53, unknown
125.5
2667
Female, age 75, unknown
121.5
2273
Male, age 74, both hemispheres
120.1
2224
Female, age 72, unknown
110.5
2316
Male, age 76, right hemisphere
99.0
2825
Male, age 18, unknown
98.3
2407
Male, age 75, both hemispheres
88.9
Red nucleus nTPM: 117.7
1821
Female, age 72, unknown
178.5
2503
Female, age 72, unknown
126.0
2725
Female, age 75, unknown
120.0
2823
Male, age 76, right hemisphere
119.5
2785
Male, age 18, unknown
117.6
1865
Male, age 51, unknown
116.5
1954
Female, age 42, unknown
109.5
2588
Male, age 74, left hemisphere
108.9
2769
Male, age 72, unknown
108.6
2227
Male, age 72, unknown
107.7
1904
Male, age 53, unknown
103.7
2584
Male, age 75, left hemisphere
95.7
Substantia nigra nTPM: 144.6
1916
Female, age 42, unknown
184.4
2241
Male, age 72, unknown
174.1
1851
Male, age 51, unknown
160.5
1941
Male, age 53, unknown
154.2
1889
Female, age 72, unknown
153.1
2409
Female, age 72, unknown
152.1
2665
Male, age 74, both hemispheres
137.1
2590
Female, age 75, unknown
121.0
2699
Male, age 18, unknown
118.2
2583
Male, age 75, right hemisphere
90.9
Superior colliculus nTPM: 110.5
1895
Male, age 76, right hemisphere
135.4
2587
Male, age 74, left hemisphere
132.2
2668
Female, age 75, unknown
123.3
2087
Female, age 72, unknown
120.9
2261
Male, age 18, unknown
113.9
1796
Male, age 53, unknown
110.8
1839
Male, age 51, unknown
104.8
1913
Female, age 42, unknown
93.0
1995
Male, age 72, unknown
86.5
2664
Male, age 75, both hemispheres
84.1
Ventral tegmental area nTPM: 120.0
2410
Female, age 72, unknown
148.6
1915
Female, age 42, unknown
143.2
2218
Male, age 76, both hemispheres
121.1
2223
Female, age 72, unknown
108.0
1942
Male, age 51, unknown
105.0
2021
Male, age 53, unknown
94.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
254.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 254.1
Samples: 139
Max nTPM: 518.2
Min nTPM: 106.1
Std nTPM: 67.2
Median nTPM: 245.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
518.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
467.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
439.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
421.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
397.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
389.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
387.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
384.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
376.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
374.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
373.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
352.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
352.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
349.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
344.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
341.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
337.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
335.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
329.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
324.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
323.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
321.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
319.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
318.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
301.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
300.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
299.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
298.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
294.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
293.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
291.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
288.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
280.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
279.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
278.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
278.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
278.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
277.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
277.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
275.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
274.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
273.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
273.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
273.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
272.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
272.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
271.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
270.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
270.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
269.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
269.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
267.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
265.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
264.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
262.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
260.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
255.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
254.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
252.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
251.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
251.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
250.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
249.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
249.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
249.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
248.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
247.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
246.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
246.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
245.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
245.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
243.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
242.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
241.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
241.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
238.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
237.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
237.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
234.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
233.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
232.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
230.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
230.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
229.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
224.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
223.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
219.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
219.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
217.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
216.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
216.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
215.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
215.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
214.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
214.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
213.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
213.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
212.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
209.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
207.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
207.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
206.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
206.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
205.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
204.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
204.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
202.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
200.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
200.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
199.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
199.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
198.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
196.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
194.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
194.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
194.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
193.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
192.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
190.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
189.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
187.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
186.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
186.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
185.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
184.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
184.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
184.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
184.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
183.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
178.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
178.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
175.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
173.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
172.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
169.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
165.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
156.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
137.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
106.1
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
540.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 540.8
Samples: 4
Max nTPM: 573.1
Min nTPM: 523.6
Sample A
Male
573.1
Sample B
Male
528.0
Sample C
Female
523.6
Sample D
Female
538.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.