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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:34.3 nTPM
HPA Brain:107.2 nTPM
GTEx:34.3 nTPM
Pig:59.9 nTPM
Mouse:74.3 nTPM
Allen mouse:11.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 101.9
2226 Male, age 75, left hemisphere 120.2
1961 Female, age 42, unknown 83.7
Dorsomedial nucleus
nTPM: 89.7
1989 Male, age 62, unknown 116.2
2041 Female, age 72, unknown 77.3
2017 Female, age 42, unknown 75.6
Lateral hypothalamic area
nTPM: 107.2
2271 Male, age 75, both hemispheres 128.9
1791 Male, age 80, right hemisphere 109.3
2228 Male, age 66, unknown 109.3
2412 Male, age 62, unknown 81.1
Mammillary body
nTPM: 105.8
1923 Female, age 72, unknown 150.4
2413 Male, age 66, unknown 107.5
1948 Female, age 72, unknown 97.2
1834 Female, age 42, unknown 93.4
1945 Male, age 80, right hemisphere 80.6
Paraventricular nucleus
nTPM: 72.6
2700 Male, age 62, unknown 72.6
Preoptic area
nTPM: 79.8
1907 Male, age 80, right hemisphere 90.5
1861 Female, age 42, unknown 76.2
2414 Female, age 72, unknown 72.7
Supraoptic nucleus
nTPM: 63.5
2835 Female, age 72, unknown 71.9
1894 Female, age 72, unknown 64.6
2043 Male, age 62, unknown 54.1
Ventromedial nucleus
nTPM: 90.0
1982 Female, age 72, unknown 98.0
1822 Female, age 42, unknown 82.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 34.3
Samples: 257

Max nTPM: 88.4
Min nTPM: 12.1
Std nTPM: 10.3
Median nTPM: 33.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 88.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 72.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 68.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 63.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 63.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 61.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 58.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 56.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 55.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 54.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 54.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 52.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 51.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 51.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 50.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 50.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 50.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 50.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 50.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 47.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 47.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 46.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 46.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 46.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 46.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 46.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 46.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 45.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 45.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 45.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 44.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 44.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 43.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 43.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 43.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 43.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 43.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 43.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 42.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 42.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 41.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 41.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 41.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 41.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 41.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 41.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 41.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 41.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 41.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 41.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 40.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 40.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 40.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 40.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 40.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 40.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 40.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 40.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 40.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 40.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 40.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 39.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 39.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 39.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 39.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 38.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 38.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 38.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 38.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 38.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 38.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 38.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 38.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 37.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 37.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 37.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 37.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 37.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 37.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 37.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 37.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 37.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 37.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 37.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 37.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 36.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 36.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 36.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 36.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 36.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 36.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 36.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 36.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 36.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 36.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 35.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 35.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 35.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 35.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 35.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 35.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 35.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 35.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 35.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 35.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 35.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 35.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 35.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 35.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 35.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 34.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 34.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 34.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 34.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 34.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 34.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 34.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 34.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 34.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 34.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 34.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 34.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 33.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 33.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 33.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 33.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 33.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 33.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 33.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 32.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 32.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 32.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 32.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 32.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 32.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 32.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 32.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 32.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 32.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 32.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 32.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 31.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 31.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 31.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 31.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 31.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 31.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 31.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 31.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 31.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 31.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 31.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 31.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 31.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 31.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 31.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 31.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 31.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 30.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 30.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 30.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 30.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 30.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 29.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 29.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 29.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 29.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 29.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 29.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 29.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 28.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 28.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 28.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 28.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 28.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 28.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 27.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 27.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 27.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 27.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 27.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 27.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 27.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 27.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 27.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 26.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 26.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 26.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 26.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 26.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 26.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 26.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 26.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 26.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 26.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 26.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 26.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 26.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 25.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 25.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 25.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 25.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 25.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 25.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 24.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 24.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 24.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 24.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 24.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 24.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 24.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 23.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 23.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 23.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 22.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 22.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 22.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 22.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 21.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 19.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 18.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 17.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 17.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 17.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 17.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 17.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 16.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 15.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 15.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 15.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 15.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 15.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 15.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 13.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 12.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 59.9
Samples: 4

Max nTPM: 69.6
Min nTPM: 49.2
Sample A Female 69.6
Sample B Female 62.5
Sample C Male 58.4
Sample D Male 49.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 74.3
Samples: 4

Max nTPM: 78.8
Min nTPM: 72.0
Sample A Male 72.0
Sample B Male 72.1
Sample C Female 78.8
Sample D Female 74.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.6
69783190 Antisense, RP_050505_04_E08, Mouse strain C57BL/6J (56 days, male) 11.6

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