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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
7136.0
nTPM
Monaco:
4133.4
nTPM
Schmiedel:
1229.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
7136.0
HPA sample
nTPM
gdT-cell nTPM: 6781.0
Samples: 6
Max nTPM: 9698.6
Min nTPM: 4033.0
P10809_1007
4033.0
P10809_1022
5538.9
P10809_1041
9116.7
P10809_1060
6973.6
P10809_1077
9698.6
P10809_1098
5325.3
MAIT T-cell nTPM: 4211.9
Samples: 6
Max nTPM: 5495.6
Min nTPM: 2918.5
P10809_1006
2918.5
P10809_1024
3526.7
P10809_1043
4501.4
P10809_1062
4954.9
P10809_1083
5495.6
P10809_1097
3874.1
Memory CD4 T-cell nTPM: 1395.0
Samples: 6
Max nTPM: 3473.9
Min nTPM: 220.3
P10809_1014
220.3
P10809_1026
631.3
P10809_1045
1038.0
P10809_1064
2706.4
P10809_1086
3473.9
P10809_1113
300.3
Memory CD8 T-cell nTPM: 7136.0
Samples: 5
Max nTPM: 8702.6
Min nTPM: 4135.0
P10809_1012
4135.0
P10809_1027
8585.0
P10809_1046
6895.6
P10809_1065
8702.6
P10809_1111
7361.7
Naive CD4 T-cell nTPM: 332.1
Samples: 6
Max nTPM: 1614.0
Min nTPM: 13.5
P10809_1015
35.3
P10809_1030
13.5
P10809_1049
83.4
P10809_1068
225.6
P10809_1085
1614.0
P10809_1112
21.0
Naive CD8 T-cell nTPM: 4027.4
Samples: 6
Max nTPM: 9247.1
Min nTPM: 457.9
P10809_1016
457.9
P10809_1031
2259.3
P10809_1050
4159.4
P10809_1069
6676.1
P10809_1087
9247.1
P10809_1110
1364.6
T-reg nTPM: 25.9
Samples: 6
Max nTPM: 40.7
Min nTPM: 9.2
P10809_1018
9.2
P10809_1037
30.6
P10809_1056
27.1
P10809_1075
40.7
P10809_1094
23.4
P10809_1106
24.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4133.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1527.6
Samples: 4
Max nTPM: 1754.5
Min nTPM: 1270.4
RHH5202_R3573
1754.5
RHH5230_R3602
1270.4
RHH5259_R3631
1377.4
RHH5288_R3660
1708.0
Effector memory CD8 T-cell nTPM: 3156.1
Samples: 4
Max nTPM: 4017.2
Min nTPM: 2438.0
RHH5203_R3574
3714.6
RHH5231_R3603
4017.2
RHH5260_R3632
2438.0
RHH5289_R3661
2454.4
MAIT T-cell nTPM: 1725.0
Samples: 4
Max nTPM: 2198.6
Min nTPM: 927.1
RHH5233_R3605
2198.6
RHH5205_R3576
927.1
RHH5262_R3634
1674.8
RHH5297_R3663
2099.4
Memory CD4 T-cell TFH nTPM: 116.8
Samples: 4
Max nTPM: 152.8
Min nTPM: 59.1
RHH5300_R3666
59.1
RHH5236_R3608
152.8
RHH5265_R3637
122.7
RHH5208_R3579
132.6
Memory CD4 T-cell Th1 nTPM: 533.1
Samples: 4
Max nTPM: 594.1
Min nTPM: 471.8
RHH5210_R3581
471.8
RHH5302_R3668
592.3
RHH5238_R3610
594.1
RHH5267_R3639
474.3
Memory CD4 T-cell Th1/Th17 nTPM: 477.0
Samples: 4
Max nTPM: 781.7
Min nTPM: 348.9
RHH5303_R3669
781.7
RHH5211_R3582
352.0
RHH5239_R3611
348.9
RHH5268_R3640
425.3
Memory CD4 T-cell Th17 nTPM: 152.9
Samples: 4
Max nTPM: 305.6
Min nTPM: 71.3
RHH5304_R3670
305.6
RHH5212_R3583
149.8
RHH5240_R3612
71.3
RHH5269_R3641
84.8
Memory CD4 T-cell Th2 nTPM: 74.3
Samples: 4
Max nTPM: 115.2
Min nTPM: 35.0
RHH5305_R3671
115.2
RHH5213_R3584
73.2
RHH5241_R3613
35.0
RHH5270_R3642
73.8
Naive CD4 T-cell nTPM: 83.5
Samples: 4
Max nTPM: 128.8
Min nTPM: 29.8
RHH5306_R3672
75.9
RHH5214_R3585
99.4
RHH5242_R3614
128.8
RHH5271_R3643
29.8
Naive CD8 T-cell nTPM: 48.1
Samples: 4
Max nTPM: 88.9
Min nTPM: 16.9
RHH5201_R3572
39.7
RHH5229_R3601
88.9
RHH5258_R3630
46.9
RHH5287_R3659
16.9
Non-Vd2 gdTCR nTPM: 3584.3
Samples: 4
Max nTPM: 4775.1
Min nTPM: 2542.3
RHH5235_R3607
2542.3
RHH5264_R3636
4775.1
RHH5207_R3578
2608.2
RHH5299_R3665
4411.5
T-reg nTPM: 83.3
Samples: 4
Max nTPM: 117.4
Min nTPM: 51.0
RHH5301_R3667
86.3
RHH5237_R3609
117.4
RHH5266_R3638
51.0
RHH5209_R3580
78.6
Terminal effector memory CD4 T-cell nTPM: 2148.0
Samples: 2
Max nTPM: 2226.9
Min nTPM: 2069.1
RHH5243_R3615
2226.9
RHH5272_R3644
2069.1
Terminal effector memory CD8 T-cell nTPM: 4133.5
Samples: 4
Max nTPM: 5167.2
Min nTPM: 3356.5
RHH5232_R3604
4010.6
RHH5204_R3575
5167.2
RHH5261_R3633
3356.5
RHH5296_R3662
3999.5
Vd2 gdTCR nTPM: 3836.9
Samples: 4
Max nTPM: 5779.3
Min nTPM: 2600.1
RHH5234_R3606
3144.9
RHH5206_R3577
5779.3
RHH5263_R3635
2600.1
RHH5298_R3664
3823.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.