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BETA
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  • CWC25
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:8.1 nTPM
Monaco:27.1 nTPM
Schmiedel:125.2 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

8.1
HPA sample nTPM
Classical monocyte
nTPM: 4.0
Samples: 6

Max nTPM: 6.1
Min nTPM: 1.9
P10809_1003 4.5
P10809_1020 6.1
P10809_1039 4.5
P10809_1058 1.9
P10809_1080 2.6
P10809_1107 4.3
Intermediate monocyte
nTPM: 3.8
Samples: 6

Max nTPM: 6.2
Min nTPM: 1.0
P10809_1004 1.0
P10809_1023 2.9
P10809_1042 5.3
P10809_1061 3.2
P10809_1081 4.0
P10809_1108 6.2
Non-classical monocyte
nTPM: 8.0
Samples: 5

Max nTPM: 20.8
Min nTPM: 3.2
P10809_1005 5.5
P10809_1053 5.8
P10809_1072 20.8
P10809_1082 3.2
P10809_1109 4.9

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

27.1
Monaco sample nTPM
Classical monocyte
nTPM: 24.3
Samples: 4

Max nTPM: 32.9
Min nTPM: 13.2
RHH5313_R3680 13.2
RHH5221_R3593 28.7
RHH5250_R3622 32.9
RHH5279_R3651 22.2
Intermediate monocyte
nTPM: 23.8
Samples: 4

Max nTPM: 35.2
Min nTPM: 18.2
RHH5314_R3681 18.2
RHH5222_R3594 35.2
RHH5251_R3623 20.8
RHH5280_R3652 20.8
Non-classical monocyte
nTPM: 27.1
Samples: 4

Max nTPM: 41.8
Min nTPM: 19.0
RHH5315_R3682 23.7
RHH5223_R3595 41.8
RHH5252_R3624 23.8
RHH5281_R3653 19.0

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

125.2
Schmiedel sample id TPM
Classical monocyte
TPM: 125.2
Samples: 91

Max TPM: 156.2
Min TPM: 93.9
MONOCYTES_1 156.2
MONOCYTES_2 154.6
MONOCYTES_3 153.9
MONOCYTES_4 150.9
MONOCYTES_5 150.7
MONOCYTES_6 150.0
MONOCYTES_7 148.8
MONOCYTES_8 146.7
MONOCYTES_9 146.4
MONOCYTES_10 145.0
MONOCYTES_11 144.8
MONOCYTES_12 143.4
MONOCYTES_13 142.2
MONOCYTES_14 142.1
MONOCYTES_15 141.8
MONOCYTES_16 141.8
MONOCYTES_17 140.8
MONOCYTES_18 139.3
MONOCYTES_19 139.1
MONOCYTES_20 138.3
MONOCYTES_21 138.2
MONOCYTES_22 137.6
MONOCYTES_23 137.5
MONOCYTES_24 137.3
MONOCYTES_25 137.1
MONOCYTES_26 137.0
MONOCYTES_27 136.9
MONOCYTES_28 136.6
MONOCYTES_29 136.5
MONOCYTES_30 136.1
MONOCYTES_31 134.2
MONOCYTES_32 133.7
MONOCYTES_33 132.5
MONOCYTES_34 131.4
MONOCYTES_35 130.7
MONOCYTES_36 129.7
MONOCYTES_37 128.5
MONOCYTES_38 128.4
MONOCYTES_39 127.7
MONOCYTES_40 126.4
MONOCYTES_41 126.3
MONOCYTES_42 125.6
MONOCYTES_43 125.4
MONOCYTES_44 124.9
MONOCYTES_45 124.3
MONOCYTES_46 123.6
MONOCYTES_47 123.0
MONOCYTES_48 122.8
MONOCYTES_49 122.3
MONOCYTES_50 122.0
MONOCYTES_51 121.3
MONOCYTES_52 120.7
MONOCYTES_53 120.2
MONOCYTES_54 120.2
MONOCYTES_55 120.1
MONOCYTES_56 120.0
MONOCYTES_57 119.7
MONOCYTES_58 119.1
MONOCYTES_59 118.0
MONOCYTES_60 117.9
MONOCYTES_61 117.9
MONOCYTES_62 116.7
MONOCYTES_63 115.9
MONOCYTES_64 115.7
MONOCYTES_65 115.1
MONOCYTES_66 114.9
MONOCYTES_67 114.7
MONOCYTES_68 114.6
MONOCYTES_69 114.2
MONOCYTES_70 111.6
MONOCYTES_71 111.5
MONOCYTES_72 111.4
MONOCYTES_73 110.2
MONOCYTES_74 109.6
MONOCYTES_75 109.4
MONOCYTES_76 108.0
MONOCYTES_77 107.2
MONOCYTES_78 107.1
MONOCYTES_79 107.0
MONOCYTES_80 106.9
MONOCYTES_81 106.8
MONOCYTES_82 106.6
MONOCYTES_83 106.2
MONOCYTES_84 105.3
MONOCYTES_85 104.5
MONOCYTES_86 103.9
MONOCYTES_87 103.2
MONOCYTES_88 101.8
MONOCYTES_89 99.5
MONOCYTES_90 94.5
MONOCYTES_91 93.9
Show allShow less
Non-classical monocyte
TPM: 57.1
Samples: 90

Max TPM: 74.4
Min TPM: 42.9
M2_1 74.4
M2_2 73.0
M2_3 71.6
M2_4 71.5
M2_5 70.7
M2_6 70.7
M2_7 70.6
M2_8 67.3
M2_9 67.0
M2_10 66.6
M2_11 65.5
M2_12 65.5
M2_13 65.5
M2_14 64.8
M2_15 64.3
M2_16 63.8
M2_17 63.7
M2_18 63.6
M2_19 62.8
M2_20 62.0
M2_21 61.5
M2_22 61.1
M2_23 60.6
M2_24 60.5
M2_25 60.2
M2_26 60.1
M2_27 60.1
M2_28 60.1
M2_29 60.1
M2_30 59.7
M2_31 59.6
M2_32 59.5
M2_33 59.2
M2_34 59.1
M2_35 58.9
M2_36 58.2
M2_37 58.1
M2_38 57.8
M2_39 57.8
M2_40 57.7
M2_41 57.5
M2_42 57.2
M2_43 56.9
M2_44 56.9
M2_45 56.4
M2_46 55.9
M2_47 55.8
M2_48 55.6
M2_49 55.5
M2_50 55.5
M2_51 55.4
M2_52 55.4
M2_53 55.4
M2_54 55.3
M2_55 55.2
M2_56 54.8
M2_57 54.7
M2_58 54.5
M2_59 54.3
M2_60 54.2
M2_61 54.0
M2_62 54.0
M2_63 53.1
M2_64 52.8
M2_65 52.8
M2_66 52.7
M2_67 52.3
M2_68 52.1
M2_69 51.9
M2_70 50.6
M2_71 50.5
M2_72 50.3
M2_73 50.2
M2_74 50.0
M2_75 49.9
M2_76 49.8
M2_77 49.7
M2_78 49.6
M2_79 49.2
M2_80 49.2
M2_81 49.0
M2_82 48.8
M2_83 48.2
M2_84 48.0
M2_85 47.6
M2_86 47.3
M2_87 46.3
M2_88 43.4
M2_89 43.1
M2_90 42.9
Show allShow less

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