Evolutionary view of MAFIP across human, rat and mouse - Staining in hippocampal formation

HIPPOCAMPAL FORMATION - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

HPA Brain:	8.6	nTPM
Mouse:	0.9	nTPM
Rat:	1.0	nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain Stereo-seq

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	8.6

Sample id

Sample description

nTPM

Dentate gyrus
nTPM: 8.4

2530	Female, age 94, left hemisphere	9.5
2531	Female, age 67, both hemispheres	9.2
2246	Female, age 85, both hemispheres	8.4
2528	Male, age 74, both hemispheres	8.2
2010	Male, age 76, both hemispheres	8.1
1927	Female, age 91, both hemispheres	7.1

Entorhinal gyrus
nTPM: 7.6

2613	Female, age 94, left hemisphere	9.9
1938	Female, age 85, left hemisphere	8.4
1787	Male, age 76, left hemisphere	7.0
2117	Female, age 91, right hemisphere	7.0
2764	Male, age 80, right hemisphere	6.8
2686	Male, age 75, right hemisphere	6.6

Hippocampus, CA1
nTPM: 8.6

2749	Male, age 80, left hemisphere	10.6
2082	Female, age 91, right hemisphere	8.8
2045	Male, age 76, both hemispheres	8.2
2527	Male, age 74, both hemispheres	8.1
1873	Female, age 85, both hemispheres	7.5

Hippocampus, CA2
nTPM: 8.5

1963	Male, age 80, left hemisphere	10.0
1940	Female, age 85, left hemisphere	8.9
2113	Female, age 91, right hemisphere	8.2
2249	Male, age 74, both hemispheres	8.2
1892	Male, age 76, both hemispheres	8.0
2437	Female, age 94, left hemisphere	7.4

Hippocampus, CA3
nTPM: 7.3

1891	Female, age 85, both hemispheres	9.0
2137	Male, age 80, left hemisphere	8.8
2620	Female, age 94, left hemisphere	7.7
1867	Male, age 76, both hemispheres	7.2
2436	Male, age 74, both hemispheres	6.1
2861	Female, age 67, both hemispheres	5.3

Parahippocampal cortex
nTPM: 6.9

2018	Male, age 76, both hemispheres	8.4
2532	Female, age 72, left hemisphere	8.2
2692	Male, age 74, both hemispheres	7.7
2245	Female, age 91, both hemispheres	6.7
1990	Female, age 91, right hemisphere	6.6
2622	Female, age 67, right hemisphere	6.4
2693	Female, age 94, both hemispheres	6.4
1850	Male, age 80, both hemispheres	6.3
1933	Female, age 85, both hemispheres	6.3
2250	Female, age 67, right hemisphere	6.2

Perirhinal gyrus
nTPM: 6.3

2521	Female, age 94, right hemisphere	7.6
1847	Female, age 91, left hemisphere	6.7
1841	Female, age 85, right hemisphere	6.5
1794	Male, age 80, right hemisphere	5.4
2848	Male, age 76, right hemisphere	5.4

Subiculum
nTPM: 8.4

2438	Female, age 94, left hemisphere	9.6
2042	Male, age 76, both hemispheres	9.2
1977	Female, age 85, both hemispheres	9.0
2729	Female, age 91, right hemisphere	8.0
1901	Male, age 80, both hemispheres	7.6
2619	Male, age 74, both hemispheres	6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	0.9

Mouse sample

Sample description

nTPM

Entorhinal cortex
nTPM: 0.5

Samples: 4

Max nTPM: 1.0
Min nTPM: 0.2

Sample A		0.3
Sample B		0.2
Sample C		1.0
Sample D		0.6

Hippocampal formation
nTPM: 0.9

Samples: 4

Max nTPM: 1.3
Min nTPM: 0.6

Sample A		0.6
Sample B		0.8
Sample C		1.0
Sample D		1.3

HIPPOCAMPAL FORMATION - Rat RNA-seq

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	1.0

Rat sample

Sample description

nTPM

Entorhinal cortex
nTPM: 0.7

Samples: 4

Max nTPM: 1.0
Min nTPM: 0.4

Sample A		0.4
Sample A		0.5
Sample A		0.9
Sample B		1.0

Ventral hippocampus
nTPM: 1.0

Samples: 4

Max nTPM: 1.3
Min nTPM: 0.7

Sample A		0.8
Sample A		0.7
Sample A		1.3
Sample A		1.3