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RHBDD2
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  • RHBDD2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:348.9 nTPM
HPA Brain:560.3 nTPM
GTEx:348.9 nTPM
Pig:274.8 nTPM
Mouse:36.8 nTPM
Allen mouse:4.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

560.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 560.3
2226 Male, age 75, left hemisphere 680.8
1961 Female, age 42, unknown 439.8
Dorsomedial nucleus
nTPM: 279.6
2041 Female, age 72, unknown 348.5
2017 Female, age 42, unknown 253.3
1989 Male, age 62, unknown 237.2
Lateral hypothalamic area
nTPM: 346.0
2228 Male, age 66, unknown 403.1
1791 Male, age 80, right hemisphere 393.8
2271 Male, age 75, both hemispheres 339.4
2412 Male, age 62, unknown 247.5
Mammillary body
nTPM: 190.3
1923 Female, age 72, unknown 236.3
2413 Male, age 66, unknown 198.9
1948 Female, age 72, unknown 188.0
1945 Male, age 80, right hemisphere 173.2
1834 Female, age 42, unknown 155.2
Paraventricular nucleus
nTPM: 286.2
2700 Male, age 62, unknown 286.2
Preoptic area
nTPM: 274.9
1907 Male, age 80, right hemisphere 377.2
1861 Female, age 42, unknown 227.2
2414 Female, age 72, unknown 220.2
Supraoptic nucleus
nTPM: 228.0
2835 Female, age 72, unknown 266.3
1894 Female, age 72, unknown 229.5
2043 Male, age 62, unknown 188.3
Ventromedial nucleus
nTPM: 431.2
1982 Female, age 72, unknown 469.3
1822 Female, age 42, unknown 393.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

348.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 348.9
Samples: 257

Max nTPM: 776.7
Min nTPM: 88.8
Std nTPM: 130.8
Median nTPM: 354.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 776.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 726.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 699.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 641.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 618.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 618.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 605.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 601.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 593.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 592.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 592.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 591.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 580.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 574.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 573.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 572.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 567.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 566.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 566.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 565.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 564.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 557.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 549.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 534.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 534.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 526.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 525.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 525.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 523.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 519.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 514.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 507.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 504.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 502.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 491.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 481.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 481.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 479.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 478.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 473.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 470.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 469.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 469.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 467.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 467.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 462.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 461.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 454.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 453.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 449.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 447.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 447.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 444.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 441.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 436.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 436.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 434.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 434.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 430.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 430.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 430.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 428.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 428.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 427.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 426.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 426.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 425.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 423.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 423.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 419.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 417.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 416.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 416.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 413.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 412.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 410.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 410.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 407.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 407.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 404.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 403.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 402.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 402.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 401.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 399.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 398.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 397.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 397.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 395.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 393.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 392.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 391.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 391.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 390.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 390.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 389.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 389.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 388.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 387.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 386.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 385.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 385.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 383.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 381.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 380.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 379.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 376.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 375.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 375.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 374.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 374.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 371.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 370.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 369.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 369.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 367.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 366.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 366.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 365.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 365.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 364.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 363.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 361.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 358.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 358.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 358.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 355.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 354.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 354.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 353.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 353.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 352.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 352.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 351.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 351.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 351.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 350.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 345.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 345.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 344.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 343.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 339.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 334.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 334.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 333.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 333.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 330.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 329.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 328.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 327.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 327.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 325.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 324.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 322.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 321.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 318.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 313.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 311.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 309.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 299.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 298.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 292.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 291.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 289.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 287.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 286.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 286.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 286.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 286.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 284.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 281.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 280.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 275.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 274.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 273.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 272.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 269.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 268.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 266.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 266.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 264.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 259.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 257.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 257.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 257.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 255.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 255.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 251.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 250.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 249.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 249.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 248.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 247.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 247.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 247.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 247.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 245.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 239.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 238.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 236.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 231.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 230.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 230.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 229.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 227.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 225.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 223.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 222.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 221.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 221.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 218.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 216.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 215.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 215.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 211.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 211.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 210.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 203.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 203.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 203.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 202.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 201.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 200.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 193.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 190.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 188.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 187.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 186.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 182.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 181.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 181.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 180.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 174.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 171.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 171.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 170.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 163.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 163.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 161.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 159.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 158.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 157.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 151.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 151.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 150.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 140.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 139.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 133.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 132.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 132.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 131.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 131.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 118.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 103.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 94.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 93.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 88.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

274.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 274.8
Samples: 4

Max nTPM: 350.3
Min nTPM: 233.2
Sample A Female 350.3
Sample B Female 233.2
Sample C Male 245.5
Sample D Male 270.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 36.8
Samples: 4

Max nTPM: 43.1
Min nTPM: 29.3
Sample A Male 38.6
Sample B Male 43.1
Sample C Female 36.2
Sample D Female 29.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.4
68301682 Antisense, RP_041130_01_F06, Mouse strain C57BL/6J (56 days, male) 8.7
70194606 Antisense, RP_050517_01_G02, Mouse strain C57BL/6J (56 days, male) 0.2

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