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ARHGAP44
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:7.3 nTPM
HPA:7.3 nTPM
GTEx:2.3 nTPM
FANTOM5:20.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038814
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.3
overview
Male, age 65
Small intestine sample 232
nTPM: 10.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 4.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 6.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 7.7

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 2.3
Samples: 187

Max nTPM: 6.4
Min nTPM: 0.5
Std nTPM: 1.0
Median nTPM: 2.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 6.4
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 6.2
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 6.0
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 5.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 5.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 5.0
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 4.8
GTEX-YFCO-1326-SM-664NV 40-49 years, male 4.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 4.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 4.5
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 4.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 4.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 4.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 4.1
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 4.0
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 4.0
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 4.0
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 3.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 3.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 3.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 3.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 3.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 3.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 3.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 3.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 3.6
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 3.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 3.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 3.5
GTEX-1122O-1326-SM-5H11F 60-69 years, female 3.4
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 3.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 3.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 3.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 3.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 3.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 3.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 3.1
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 3.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 3.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 3.0
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 2.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 2.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 2.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 2.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 2.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 2.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 2.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 2.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 2.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 2.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 2.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 2.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 2.5
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 2.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2.5
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 2.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 2.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 2.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 2.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 2.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 2.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 2.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 2.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 2.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 2.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 2.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 2.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 2.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 2.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 2.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 2.1
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 2.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 2.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 2.1
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2.1
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 2.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 2.0
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1.9
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1.9
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1.8
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1.8
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1.8
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1.8
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1.8
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1.7
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1.7
GTEX-1192X-2526-SM-59868 50-59 years, male 1.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1.6
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1.6
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1.6
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1.6
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1.6
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1.5
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1.5
GTEX-183FY-1626-SM-793D8 20-29 years, male 1.5
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1.5
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1.4
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1.4
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1.3
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1.3
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1.2
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1.1
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1.1
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1.0
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 0.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 0.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 0.5
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 20.9
FF:10024-101D6 15,40,85 years, mixed 20.9

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