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CCDC124
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  • TISSUE

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  • CCDC124
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:97.1 nTPM
HPA Brain:74.1 nTPM
GTEx:97.1 nTPM
Pig:18.6 nTPM
Mouse:26.5 nTPM
Allen mouse:5.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.1
2226 Male, age 75, left hemisphere 57.2
1961 Female, age 42, unknown 52.9
Dorsomedial nucleus
nTPM: 66.4
1989 Male, age 62, unknown 81.4
2041 Female, age 72, unknown 60.9
2017 Female, age 42, unknown 56.7
Lateral hypothalamic area
nTPM: 71.3
1791 Male, age 80, right hemisphere 81.3
2271 Male, age 75, both hemispheres 72.9
2228 Male, age 66, unknown 66.7
2412 Male, age 62, unknown 64.4
Mammillary body
nTPM: 74.1
1923 Female, age 72, unknown 80.1
1948 Female, age 72, unknown 75.2
2413 Male, age 66, unknown 73.2
1834 Female, age 42, unknown 71.3
1945 Male, age 80, right hemisphere 70.6
Paraventricular nucleus
nTPM: 72.8
2700 Male, age 62, unknown 72.8
Preoptic area
nTPM: 62.2
1861 Female, age 42, unknown 68.4
1907 Male, age 80, right hemisphere 59.4
2414 Female, age 72, unknown 58.8
Supraoptic nucleus
nTPM: 66.4
2835 Female, age 72, unknown 81.1
2043 Male, age 62, unknown 60.8
1894 Female, age 72, unknown 57.2
Ventromedial nucleus
nTPM: 54.0
1982 Female, age 72, unknown 59.6
1822 Female, age 42, unknown 48.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 97.1
Samples: 257

Max nTPM: 206.3
Min nTPM: 36.1
Std nTPM: 22.9
Median nTPM: 92.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 206.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 185.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 165.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 161.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 155.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 149.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 148.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 146.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 146.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 145.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 145.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 142.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 140.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 137.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 137.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 137.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 137.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 134.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 134.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 132.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 131.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 126.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 126.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 125.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 125.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 125.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 125.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 124.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 123.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 122.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 122.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 122.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 122.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 122.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 120.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 120.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 119.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 119.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 118.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 118.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 117.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 117.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 117.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 117.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 116.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 116.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 115.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 115.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 115.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 115.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 114.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 114.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 113.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 113.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 112.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 111.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 111.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 111.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 110.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 110.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 110.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 109.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 109.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 109.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 108.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 108.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 108.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 108.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 108.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 107.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 106.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 106.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 106.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 106.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 105.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 105.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 105.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 104.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 104.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 104.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 104.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 104.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 104.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 103.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 103.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 103.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 103.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 103.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 102.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 102.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 102.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 102.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 101.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 101.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 101.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 101.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 100.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 100.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 100.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 100.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 100.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 99.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 98.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 98.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 98.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 98.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 97.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 97.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 97.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 97.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 96.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 96.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 95.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 95.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 94.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 94.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 94.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 94.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 93.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 93.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 93.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 93.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 93.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 93.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 93.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 92.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 92.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 92.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 92.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 92.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 91.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 91.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 91.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 91.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 90.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 90.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 90.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 90.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 90.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 90.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 90.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 89.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 89.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 89.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 89.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 89.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 89.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 88.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 88.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 88.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 88.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 88.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 88.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 87.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 87.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 87.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 87.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 87.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 87.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 87.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 87.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 86.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 86.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 86.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 86.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 86.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 85.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 85.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 85.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 85.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 85.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 85.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 85.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 84.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 84.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 83.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 83.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 83.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 83.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 83.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 82.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 82.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 82.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 82.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 82.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 82.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 81.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 81.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 81.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 81.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 81.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 81.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 81.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 81.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 81.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 81.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 80.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 80.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 80.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 79.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 79.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 79.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 79.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 79.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 79.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 79.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 79.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 78.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 78.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 78.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 78.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 78.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 78.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 77.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 77.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 76.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 76.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 76.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 76.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 76.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 76.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 76.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 75.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 75.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 75.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 75.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 75.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 74.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 73.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 73.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 73.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 73.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 72.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 72.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 72.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 71.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 71.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 71.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 71.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 71.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 71.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 70.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 69.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 69.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 68.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 65.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 65.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 63.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 62.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 53.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 42.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 37.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 37.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 36.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 18.6
Samples: 4

Max nTPM: 24.1
Min nTPM: 13.7
Sample A Female 24.1
Sample B Female 18.4
Sample C Male 18.0
Sample D Male 13.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 26.5
Samples: 4

Max nTPM: 30.1
Min nTPM: 23.6
Sample A Male 28.4
Sample B Male 30.1
Sample C Female 23.6
Sample D Female 23.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.0
69174040 Antisense, RP_050329_01_H12, Mouse strain C57BL/6J (56 days, male) 5.0

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