HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:53.8 nTPM
HPA Brain:141.7 nTPM
GTEx:53.8 nTPM
FANTOM5:151.1 Scaled Tags Per Million
Pig:198.4 nTPM
Mouse:205.0 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020036Antibody CAB004489
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 141.7
Sample id Sample description nTPM
Hippocampus
nTPM: 109.1
1898 Male, age 80, left hemisphere 159.8
1855 Male, age 76, left hemisphere 122.5
2621 Female, age 67, right hemisphere 101.1
2529 Female, age 94, left hemisphere 98.7
1911 Female, age 85, right hemisphere 87.1
2148 Female, age 91, left hemisphere 85.2
Dentate gyrus
nTPM: 107.8
1927 Female, age 91, both hemispheres 131.8
2010 Male, age 76, both hemispheres 127.8
2530 Female, age 94, left hemisphere 103.6
2246 Female, age 85, both hemispheres 100.2
2528 Male, age 74, both hemispheres 92.6
2531 Female, age 67, both hemispheres 90.6
Entorhinal gyrus
nTPM: 113.9
1938 Female, age 85, left hemisphere 130.9
2764 Male, age 80, right hemisphere 129.5
2613 Female, age 94, left hemisphere 114.0
1787 Male, age 76, left hemisphere 113.2
2686 Male, age 75, right hemisphere 109.0
2117 Female, age 91, right hemisphere 86.8
Hippocampus, CA1
nTPM: 130.5
2749 Male, age 80, left hemisphere 227.2
1873 Female, age 85, both hemispheres 134.7
2045 Male, age 76, both hemispheres 104.9
2527 Male, age 74, both hemispheres 101.7
2082 Female, age 91, right hemisphere 84.1
Hippocampus, CA2
nTPM: 115.4
1892 Male, age 76, both hemispheres 175.9
1963 Male, age 80, left hemisphere 157.0
1940 Female, age 85, left hemisphere 101.2
2437 Female, age 94, left hemisphere 91.9
2249 Male, age 74, both hemispheres 88.6
2113 Female, age 91, right hemisphere 78.0
Hippocampus, CA3
nTPM: 115.1
2137 Male, age 80, left hemisphere 166.8
1867 Male, age 76, both hemispheres 144.5
1891 Female, age 85, both hemispheres 102.7
2620 Female, age 94, left hemisphere 99.4
2861 Female, age 67, both hemispheres 92.0
2436 Male, age 74, both hemispheres 85.4
Parahippocampal cortex
nTPM: 113.3
1850 Male, age 80, both hemispheres 161.5
1933 Female, age 85, both hemispheres 129.2
1990 Female, age 91, right hemisphere 120.4
2245 Female, age 91, both hemispheres 118.5
2532 Female, age 72, left hemisphere 109.6
2250 Female, age 67, right hemisphere 107.1
2693 Female, age 94, both hemispheres 106.6
2692 Male, age 74, both hemispheres 100.9
2622 Female, age 67, right hemisphere 91.8
2018 Male, age 76, both hemispheres 87.0
Perirhinal gyrus
nTPM: 141.7
1847 Female, age 91, left hemisphere 168.5
1794 Male, age 80, right hemisphere 158.3
1841 Female, age 85, right hemisphere 141.5
2521 Female, age 94, right hemisphere 127.0
2848 Male, age 76, right hemisphere 113.3
Subiculum
nTPM: 102.9
1901 Male, age 80, both hemispheres 133.1
1977 Female, age 85, both hemispheres 124.2
2438 Female, age 94, left hemisphere 97.1
2042 Male, age 76, both hemispheres 94.1
2619 Male, age 74, both hemispheres 90.9
2729 Female, age 91, right hemisphere 77.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 53.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.8
Samples: 197

Max nTPM: 97.4
Min nTPM: 26.2
Std nTPM: 13.2
Median nTPM: 49.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 95.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 90.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 88.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 87.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 87.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 87.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 85.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 83.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 83.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 82.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 151.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.1
FF:10153-102I9 76 years, female 177.5
FF:10169-103B7 60 years, female 124.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 198.4
Pig sample Sample description nTPM
Subiculum
nTPM: 185.3
Samples: 4

Max nTPM: 230.3
Min nTPM: 165.8
Sample A Female 230.3
Sample B Female 165.8
Sample C Male 173.9
Sample D Male 171.2
Dorsal hippocampus
nTPM: 195.9
Samples: 4

Max nTPM: 222.2
Min nTPM: 162.0
Sample A Female 222.2
Sample B Female 196.1
Sample C Male 203.3
Sample D Male 162.0
Entorhinal cortex
nTPM: 198.4
Samples: 4

Max nTPM: 206.4
Min nTPM: 188.1
Sample A Female 195.2
Sample B Female 206.4
Sample C Male 204.0
Sample D Male 188.1
Ventral hippocampus
nTPM: 173.4
Samples: 4

Max nTPM: 189.8
Min nTPM: 144.1
Sample A Female 189.6
Sample B Female 144.1
Sample C Male 169.9
Sample D Male 189.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 205.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 205.1
Samples: 4

Max nTPM: 245.6
Min nTPM: 183.8
Sample A Male 192.6
Sample B Male 198.2
Sample C Female 183.8
Sample D Female 245.6
Hippocampal formation
nTPM: 194.7
Samples: 4

Max nTPM: 228.2
Min nTPM: 163.4
Sample A Male 177.7
Sample B Male 209.4
Sample C Female 228.2
Sample D Female 163.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
2461 Antisense, RP_Baylor_253954, Mouse strain C57BL/6J (56 days, male) 21.9
2460 Antisense, RP_Baylor_253954, Mouse strain C57BL/6J (56 days, male) 19.2
71765004 Antisense, RP_050926_02_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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