HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:44.0 nTPM
HPA Brain:102.5 nTPM
GTEx:44.0 nTPM
FANTOM5:196.2 Scaled Tags Per Million
Pig:101.5 nTPM
Mouse:135.0 nTPM
Allen mouse:18.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040446
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 102.5
Sample id Sample description nTPM
Hippocampus
nTPM: 91.9
2529 Female, age 94, left hemisphere 110.8
1898 Male, age 80, left hemisphere 94.0
1911 Female, age 85, right hemisphere 93.6
2621 Female, age 67, right hemisphere 92.4
2148 Female, age 91, left hemisphere 85.6
1855 Male, age 76, left hemisphere 75.1
Dentate gyrus
nTPM: 91.4
2530 Female, age 94, left hemisphere 103.5
2528 Male, age 74, both hemispheres 99.3
2010 Male, age 76, both hemispheres 95.5
2246 Female, age 85, both hemispheres 84.8
1927 Female, age 91, both hemispheres 84.3
2531 Female, age 67, both hemispheres 80.9
Entorhinal gyrus
nTPM: 102.5
2686 Male, age 75, right hemisphere 115.0
2117 Female, age 91, right hemisphere 112.8
2764 Male, age 80, right hemisphere 103.7
1938 Female, age 85, left hemisphere 99.3
1787 Male, age 76, left hemisphere 97.7
2613 Female, age 94, left hemisphere 86.7
Hippocampus, CA1
nTPM: 85.8
2527 Male, age 74, both hemispheres 96.2
2749 Male, age 80, left hemisphere 94.3
1873 Female, age 85, both hemispheres 88.3
2082 Female, age 91, right hemisphere 80.5
2045 Male, age 76, both hemispheres 69.8
Hippocampus, CA2
nTPM: 97.3
1963 Male, age 80, left hemisphere 108.7
2437 Female, age 94, left hemisphere 104.3
2249 Male, age 74, both hemispheres 95.0
1892 Male, age 76, both hemispheres 93.0
1940 Female, age 85, left hemisphere 92.7
2113 Female, age 91, right hemisphere 90.2
Hippocampus, CA3
nTPM: 85.5
1891 Female, age 85, both hemispheres 105.9
1867 Male, age 76, both hemispheres 90.9
2861 Female, age 67, both hemispheres 84.7
2436 Male, age 74, both hemispheres 79.1
2137 Male, age 80, left hemisphere 78.6
2620 Female, age 94, left hemisphere 73.9
Parahippocampal cortex
nTPM: 92.8
2692 Male, age 74, both hemispheres 106.3
1850 Male, age 80, both hemispheres 101.5
1990 Female, age 91, right hemisphere 96.9
2018 Male, age 76, both hemispheres 96.9
1933 Female, age 85, both hemispheres 96.5
2245 Female, age 91, both hemispheres 90.8
2532 Female, age 72, left hemisphere 87.9
2622 Female, age 67, right hemisphere 87.6
2693 Female, age 94, both hemispheres 84.1
2250 Female, age 67, right hemisphere 80.0
Perirhinal gyrus
nTPM: 94.0
1794 Male, age 80, right hemisphere 100.2
1841 Female, age 85, right hemisphere 95.7
1847 Female, age 91, left hemisphere 94.4
2848 Male, age 76, right hemisphere 92.6
2521 Female, age 94, right hemisphere 86.9
Subiculum
nTPM: 101.0
1901 Male, age 80, both hemispheres 108.8
2619 Male, age 74, both hemispheres 107.3
2042 Male, age 76, both hemispheres 104.1
1977 Female, age 85, both hemispheres 101.9
2438 Female, age 94, left hemisphere 98.3
2729 Female, age 91, right hemisphere 85.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 255

Max nTPM: 125.0
Min nTPM: 18.8
Std nTPM: 15.1
Median nTPM: 42.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 125.0
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 97.8
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 93.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 88.5
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 87.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 86.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 81.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 77.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 75.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 73.2
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 71.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 196.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 196.2
FF:10153-102I9 76 years, female 236.6
FF:10169-103B7 60 years, female 155.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 101.5
Pig sample Sample description nTPM
Subiculum
nTPM: 97.3
Samples: 4

Max nTPM: 112.4
Min nTPM: 88.9
Sample A Female 112.4
Sample B Female 94.1
Sample C Male 88.9
Sample D Male 93.6
Dorsal hippocampus
nTPM: 92.7
Samples: 4

Max nTPM: 105.5
Min nTPM: 76.4
Sample A Female 99.7
Sample B Female 89.0
Sample C Male 105.5
Sample D Male 76.4
Entorhinal cortex
nTPM: 101.5
Samples: 4

Max nTPM: 106.7
Min nTPM: 96.5
Sample A Female 100.6
Sample B Female 106.7
Sample C Male 102.2
Sample D Male 96.5
Ventral hippocampus
nTPM: 85.7
Samples: 4

Max nTPM: 93.6
Min nTPM: 74.6
Sample A Female 93.0
Sample B Female 81.5
Sample C Male 74.6
Sample D Male 93.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 135.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 135.0
Samples: 4

Max nTPM: 144.0
Min nTPM: 126.9
Sample A Male 141.3
Sample B Male 144.0
Sample C Female 126.9
Sample D Female 127.9
Hippocampal formation
nTPM: 106.4
Samples: 4

Max nTPM: 112.5
Min nTPM: 100.7
Sample A Male 112.5
Sample B Male 109.6
Sample C Female 100.7
Sample D Female 102.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.3
70302246 Antisense, RP_050607_03_H09, Mouse strain C57BL/6J (56 days, male) 18.3

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