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  • TISSUE

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  • MGST1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:139.4 nTPM
HPA Brain:142.9 nTPM
GTEx:139.4 nTPM
Pig:60.0 nTPM
Mouse:55.6 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 125.3
2226 Male, age 75, left hemisphere 153.2
1961 Female, age 42, unknown 97.5
Dorsomedial nucleus
nTPM: 81.9
2041 Female, age 72, unknown 87.0
1989 Male, age 62, unknown 79.6
2017 Female, age 42, unknown 79.1
Lateral hypothalamic area
nTPM: 98.9
1791 Male, age 80, right hemisphere 171.9
2271 Male, age 75, both hemispheres 96.7
2412 Male, age 62, unknown 68.3
2228 Male, age 66, unknown 58.5
Mammillary body
nTPM: 107.8
2413 Male, age 66, unknown 122.1
1945 Male, age 80, right hemisphere 117.5
1834 Female, age 42, unknown 113.1
1923 Female, age 72, unknown 101.4
1948 Female, age 72, unknown 85.1
Paraventricular nucleus
nTPM: 84.5
2700 Male, age 62, unknown 84.5
Preoptic area
nTPM: 113.2
1907 Male, age 80, right hemisphere 159.5
1861 Female, age 42, unknown 108.4
2414 Female, age 72, unknown 71.8
Supraoptic nucleus
nTPM: 142.9
1894 Female, age 72, unknown 186.7
2043 Male, age 62, unknown 160.9
2835 Female, age 72, unknown 81.0
Ventromedial nucleus
nTPM: 100.4
1822 Female, age 42, unknown 105.3
1982 Female, age 72, unknown 95.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 139.4
Samples: 257

Max nTPM: 803.7
Min nTPM: 18.8
Std nTPM: 98.3
Median nTPM: 116.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 803.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 575.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 561.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 491.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 424.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 411.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 394.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 382.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 361.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 355.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 343.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 342.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 338.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 329.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 328.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 323.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 319.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 305.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 298.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 297.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 293.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 288.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 276.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 269.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 263.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 250.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 244.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 235.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 235.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 230.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 222.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 222.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 218.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 217.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 211.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 211.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 209.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 205.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 205.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 203.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 198.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 196.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 194.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 193.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 192.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 190.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 186.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 185.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 185.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 184.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 184.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 184.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 180.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 180.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 179.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 178.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 177.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 174.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 174.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 172.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 171.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 171.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 169.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 169.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 167.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 162.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 162.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 161.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 159.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 158.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 158.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 158.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 156.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 156.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 155.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 153.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 153.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 152.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 150.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 149.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 148.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 147.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 147.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 147.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 147.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 146.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 145.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 144.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 144.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 143.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 142.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 142.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 141.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 140.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 140.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 139.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 137.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 135.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 134.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 134.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 134.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 132.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 132.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 130.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 130.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 130.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 129.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 129.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 127.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 125.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 125.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 124.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 124.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 124.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 123.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 123.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 123.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 123.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 122.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 122.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 122.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 121.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 121.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 119.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 119.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 119.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 117.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 116.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 116.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 116.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 116.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 114.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 111.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 110.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 110.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 110.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 108.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 108.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 108.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 107.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 106.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 106.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 105.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 105.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 103.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 103.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 102.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 102.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 102.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 102.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 101.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 100.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 100.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 99.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 99.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 98.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 98.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 97.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 96.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 96.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 95.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 95.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 94.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 94.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 93.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 93.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 93.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 93.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 92.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 91.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 90.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 90.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 89.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 89.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 87.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 87.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 87.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 86.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 85.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 84.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 82.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 82.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 81.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 81.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 81.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 81.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 80.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 80.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 79.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 78.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 78.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 77.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 77.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 77.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 76.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 76.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 76.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 76.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 75.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 73.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 73.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 72.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 71.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 68.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 68.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 68.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 67.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 67.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 67.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 67.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 66.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 66.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 65.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 65.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 65.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 64.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 64.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 63.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 63.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 63.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 62.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 60.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 59.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 59.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 57.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 57.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 57.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 56.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 56.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 55.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 55.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 55.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 53.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 53.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 52.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 52.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 52.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 52.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 50.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 49.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 49.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 46.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 46.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 46.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 40.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 38.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 37.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 30.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 24.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 24.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 22.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 19.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 18.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 60.1
Samples: 4

Max nTPM: 72.9
Min nTPM: 46.5
Sample A Female 72.9
Sample B Female 59.1
Sample C Male 61.7
Sample D Male 46.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 55.6
Samples: 4

Max nTPM: 58.5
Min nTPM: 50.5
Sample A Male 56.4
Sample B Male 58.5
Sample C Female 57.0
Sample D Female 50.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
68269646 Antisense, RP_041129_02_A02, Mouse strain C57BL/6J (56 days, male) 0.1

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