HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:56.7 nTPM
HPA Brain:104.7 nTPM
GTEx:56.7 nTPM
FANTOM5:89.2 Scaled Tags Per Million
Pig:2.4 nTPM
Mouse:9.1 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018174
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 104.7
Sample id Sample description nTPM
Hippocampus
nTPM: 80.3
1911 Female, age 85, right hemisphere 108.6
2621 Female, age 67, right hemisphere 79.0
2529 Female, age 94, left hemisphere 75.7
1855 Male, age 76, left hemisphere 75.6
2148 Female, age 91, left hemisphere 71.6
1898 Male, age 80, left hemisphere 71.1
Dentate gyrus
nTPM: 86.9
2530 Female, age 94, left hemisphere 127.7
2528 Male, age 74, both hemispheres 111.9
2246 Female, age 85, both hemispheres 98.8
2010 Male, age 76, both hemispheres 82.8
2531 Female, age 67, both hemispheres 51.9
1927 Female, age 91, both hemispheres 48.7
Entorhinal gyrus
nTPM: 77.3
2117 Female, age 91, right hemisphere 106.7
2764 Male, age 80, right hemisphere 103.1
1787 Male, age 76, left hemisphere 87.0
1938 Female, age 85, left hemisphere 71.0
2613 Female, age 94, left hemisphere 54.1
2686 Male, age 75, right hemisphere 42.2
Hippocampus, CA1
nTPM: 75.1
2527 Male, age 74, both hemispheres 105.6
1873 Female, age 85, both hemispheres 101.8
2082 Female, age 91, right hemisphere 70.4
2749 Male, age 80, left hemisphere 57.4
2045 Male, age 76, both hemispheres 40.3
Hippocampus, CA2
nTPM: 81.2
1940 Female, age 85, left hemisphere 117.3
2249 Male, age 74, both hemispheres 101.3
1963 Male, age 80, left hemisphere 90.8
2113 Female, age 91, right hemisphere 68.8
2437 Female, age 94, left hemisphere 65.4
1892 Male, age 76, both hemispheres 43.6
Hippocampus, CA3
nTPM: 64.9
1891 Female, age 85, both hemispheres 113.4
2436 Male, age 74, both hemispheres 72.6
1867 Male, age 76, both hemispheres 58.5
2620 Female, age 94, left hemisphere 56.7
2861 Female, age 67, both hemispheres 49.4
2137 Male, age 80, left hemisphere 38.9
Parahippocampal cortex
nTPM: 67.9
2692 Male, age 74, both hemispheres 91.3
2532 Female, age 72, left hemisphere 83.8
2018 Male, age 76, both hemispheres 81.8
1933 Female, age 85, both hemispheres 72.4
1990 Female, age 91, right hemisphere 69.5
1850 Male, age 80, both hemispheres 60.5
2250 Female, age 67, right hemisphere 59.9
2245 Female, age 91, both hemispheres 54.7
2622 Female, age 67, right hemisphere 53.0
2693 Female, age 94, both hemispheres 51.7
Perirhinal gyrus
nTPM: 50.5
2848 Male, age 76, right hemisphere 63.0
1794 Male, age 80, right hemisphere 54.6
1841 Female, age 85, right hemisphere 51.5
2521 Female, age 94, right hemisphere 45.2
1847 Female, age 91, left hemisphere 38.0
Subiculum
nTPM: 104.7
2042 Male, age 76, both hemispheres 158.6
1901 Male, age 80, both hemispheres 116.1
2619 Male, age 74, both hemispheres 105.7
2729 Female, age 91, right hemisphere 94.8
1977 Female, age 85, both hemispheres 91.6
2438 Female, age 94, left hemisphere 61.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 56.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.7
Samples: 255

Max nTPM: 179.9
Min nTPM: 6.1
Std nTPM: 29.9
Median nTPM: 49.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 179.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 154.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 151.8
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 150.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 148.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 140.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 137.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 127.6
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 123.2
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 121.4
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 114.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.2
FF:10153-102I9 76 years, female 111.0
FF:10169-103B7 60 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2.4
Pig sample Sample description nTPM
Subiculum
nTPM: 2.3
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.7
Sample A Female 1.7
Sample B Female 2.4
Sample C Male 2.5
Sample D Male 2.7
Dorsal hippocampus
nTPM: 2.5
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.7
Sample A Female 1.7
Sample B Female 2.4
Sample C Male 3.0
Sample D Male 2.7
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.9
Sample A Female 2.7
Sample B Female 2.6
Sample C Male 1.9
Sample D Male 2.3
Ventral hippocampus
nTPM: 2.4
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 2.1
Sample C Male 2.5
Sample D Male 2.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.0
Sample A Male 8.8
Sample B Male 8.2
Sample C Female 6.0
Sample D Female 5.0
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.5
Sample A Male 7.5
Sample B Male 8.6
Sample C Female 11.2
Sample D Female 9.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
80514103 Antisense, RP_080505_03_H04, Mouse strain C57BL/6J (56 days, male) 0.0

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