A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
5001.3
nTPM
Monaco:
1089.8
nTPM
Schmiedel:
2055.5
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
5001.3
HPA sample
nTPM
Classical monocyte nTPM: 5001.3
Samples: 6
Max nTPM: 10317.1
Min nTPM: 3387.5
P10809_1003
10317.1
P10809_1020
3609.1
P10809_1039
4175.0
P10809_1058
3562.1
P10809_1080
3387.5
P10809_1107
4956.8
Intermediate monocyte nTPM: 3377.7
Samples: 6
Max nTPM: 4920.9
Min nTPM: 2181.6
P10809_1004
2774.3
P10809_1023
3617.5
P10809_1042
3732.3
P10809_1061
2181.6
P10809_1081
3039.4
P10809_1108
4920.9
Non-classical monocyte nTPM: 3433.2
Samples: 5
Max nTPM: 4763.8
Min nTPM: 2689.3
P10809_1005
3309.6
P10809_1053
3277.1
P10809_1072
3126.3
P10809_1082
2689.3
P10809_1109
4763.8
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1089.8
Monaco sample
nTPM
Classical monocyte nTPM: 817.8
Samples: 4
Max nTPM: 1281.4
Min nTPM: 514.7
RHH5313_R3680
1281.4
RHH5221_R3593
678.1
RHH5250_R3622
514.7
RHH5279_R3651
796.8
Intermediate monocyte nTPM: 1089.8
Samples: 4
Max nTPM: 1290.5
Min nTPM: 647.9
RHH5314_R3681
1290.5
RHH5222_R3594
1283.5
RHH5251_R3623
1137.2
RHH5280_R3652
647.9
Non-classical monocyte nTPM: 816.6
Samples: 4
Max nTPM: 1206.7
Min nTPM: 499.5
RHH5315_R3682
1206.7
RHH5223_R3595
801.2
RHH5252_R3624
758.9
RHH5281_R3653
499.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
2055.5
Schmiedel sample id
TPM
Classical monocyte TPM: 2055.5
Samples: 91
Max TPM: 2874.4
Min TPM: 1187.1
MONOCYTES_1
2874.4
MONOCYTES_2
2759.8
MONOCYTES_3
2700.0
MONOCYTES_4
2660.7
MONOCYTES_5
2654.0
MONOCYTES_6
2588.4
MONOCYTES_7
2562.6
MONOCYTES_8
2506.8
MONOCYTES_9
2498.1
MONOCYTES_10
2491.4
MONOCYTES_11
2490.3
MONOCYTES_12
2488.0
MONOCYTES_13
2482.9
MONOCYTES_14
2480.6
MONOCYTES_15
2471.2
MONOCYTES_16
2462.1
MONOCYTES_17
2453.4
MONOCYTES_18
2451.6
MONOCYTES_19
2443.3
MONOCYTES_20
2439.1
MONOCYTES_21
2433.8
MONOCYTES_22
2423.6
MONOCYTES_23
2401.9
MONOCYTES_24
2384.1
MONOCYTES_25
2378.9
MONOCYTES_26
2333.6
MONOCYTES_27
2301.1
MONOCYTES_28
2276.8
MONOCYTES_29
2261.3
MONOCYTES_30
2261.1
MONOCYTES_31
2255.6
MONOCYTES_32
2250.3
MONOCYTES_33
2249.5
MONOCYTES_34
2189.4
MONOCYTES_35
2186.0
MONOCYTES_36
2165.8
MONOCYTES_37
2118.1
MONOCYTES_38
2094.3
MONOCYTES_39
2093.2
MONOCYTES_40
2077.6
MONOCYTES_41
2062.0
MONOCYTES_42
2046.0
MONOCYTES_43
2045.1
MONOCYTES_44
2034.2
MONOCYTES_45
2026.5
MONOCYTES_46
2021.3
MONOCYTES_47
2009.5
MONOCYTES_48
2007.7
MONOCYTES_49
2003.0
MONOCYTES_50
2002.7
MONOCYTES_51
1999.4
MONOCYTES_52
1984.3
MONOCYTES_53
1982.7
MONOCYTES_54
1974.5
MONOCYTES_55
1972.0
MONOCYTES_56
1960.3
MONOCYTES_57
1948.6
MONOCYTES_58
1942.1
MONOCYTES_59
1920.0
MONOCYTES_60
1914.7
MONOCYTES_61
1909.0
MONOCYTES_62
1898.4
MONOCYTES_63
1878.6
MONOCYTES_64
1850.4
MONOCYTES_65
1845.3
MONOCYTES_66
1836.2
MONOCYTES_67
1836.1
MONOCYTES_68
1820.9
MONOCYTES_69
1779.2
MONOCYTES_70
1722.4
MONOCYTES_71
1711.6
MONOCYTES_72
1708.6
MONOCYTES_73
1700.8
MONOCYTES_74
1690.4
MONOCYTES_75
1674.7
MONOCYTES_76
1670.8
MONOCYTES_77
1649.2
MONOCYTES_78
1644.8
MONOCYTES_79
1644.7
MONOCYTES_80
1623.5
MONOCYTES_81
1583.9
MONOCYTES_82
1582.4
MONOCYTES_83
1581.2
MONOCYTES_84
1576.5
MONOCYTES_85
1508.5
MONOCYTES_86
1466.4
MONOCYTES_87
1442.3
MONOCYTES_88
1420.0
MONOCYTES_89
1332.9
MONOCYTES_90
1325.5
MONOCYTES_91
1187.1
Show allShow less
Non-classical monocyte TPM: 1482.7
Samples: 90
Max TPM: 2322.4
Min TPM: 636.7
M2_1
2322.4
M2_2
2239.4
M2_3
2199.7
M2_4
2190.2
M2_5
2106.0
M2_6
2062.4
M2_7
2041.3
M2_8
2015.5
M2_9
2013.9
M2_10
1966.5
M2_11
1959.3
M2_12
1958.3
M2_13
1957.1
M2_14
1938.2
M2_15
1905.9
M2_16
1895.7
M2_17
1893.6
M2_18
1884.0
M2_19
1875.1
M2_20
1833.9
M2_21
1812.6
M2_22
1784.5
M2_23
1780.4
M2_24
1774.0
M2_25
1757.5
M2_26
1748.2
M2_27
1722.0
M2_28
1714.8
M2_29
1690.9
M2_30
1683.0
M2_31
1680.5
M2_32
1673.5
M2_33
1666.4
M2_34
1666.0
M2_35
1658.2
M2_36
1633.6
M2_37
1577.3
M2_38
1573.5
M2_39
1554.8
M2_40
1547.1
M2_41
1539.5
M2_42
1513.5
M2_43
1495.5
M2_44
1487.8
M2_45
1473.3
M2_46
1458.9
M2_47
1456.4
M2_48
1419.4
M2_49
1415.8
M2_50
1415.3
M2_51
1412.8
M2_52
1375.8
M2_53
1368.3
M2_54
1360.8
M2_55
1358.0
M2_56
1357.3
M2_57
1356.4
M2_58
1354.1
M2_59
1346.4
M2_60
1338.9
M2_61
1305.7
M2_62
1298.4
M2_63
1283.0
M2_64
1274.2
M2_65
1265.6
M2_66
1245.9
M2_67
1233.9
M2_68
1215.0
M2_69
1212.2
M2_70
1162.7
M2_71
1145.9
M2_72
1134.8
M2_73
1100.6
M2_74
1070.1
M2_75
1048.5
M2_76
1047.2
M2_77
1046.8
M2_78
1002.5
M2_79
982.7
M2_80
960.0
M2_81
950.9
M2_82
946.7
M2_83
933.5
M2_84
876.9
M2_85
839.3
M2_86
796.2
M2_87
759.1
M2_88
707.6
M2_89
700.3
M2_90
636.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.