HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:191.7 nTPM
HPA Brain:182.4 nTPM
GTEx:191.7 nTPM
FANTOM5:81.1 Scaled Tags Per Million
Pig:210.8 nTPM
Mouse:315.8 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 182.4
Sample id Sample description nTPM
Hippocampus
nTPM: 118.9
1911 Female, age 85, right hemisphere 151.5
2621 Female, age 67, right hemisphere 137.9
1898 Male, age 80, left hemisphere 126.8
2529 Female, age 94, left hemisphere 106.9
2148 Female, age 91, left hemisphere 101.8
1855 Male, age 76, left hemisphere 88.7
Dentate gyrus
nTPM: 138.7
2530 Female, age 94, left hemisphere 182.4
2531 Female, age 67, both hemispheres 171.5
2246 Female, age 85, both hemispheres 143.0
2010 Male, age 76, both hemispheres 117.3
1927 Female, age 91, both hemispheres 109.5
2528 Male, age 74, both hemispheres 108.7
Entorhinal gyrus
nTPM: 182.4
1938 Female, age 85, left hemisphere 213.7
2686 Male, age 75, right hemisphere 210.2
2764 Male, age 80, right hemisphere 181.4
2613 Female, age 94, left hemisphere 170.3
2117 Female, age 91, right hemisphere 168.9
1787 Male, age 76, left hemisphere 150.0
Hippocampus, CA1
nTPM: 125.6
2749 Male, age 80, left hemisphere 187.1
2527 Male, age 74, both hemispheres 125.7
1873 Female, age 85, both hemispheres 111.9
2082 Female, age 91, right hemisphere 106.0
2045 Male, age 76, both hemispheres 97.1
Hippocampus, CA2
nTPM: 130.6
1940 Female, age 85, left hemisphere 161.1
2437 Female, age 94, left hemisphere 139.0
1892 Male, age 76, both hemispheres 138.2
2249 Male, age 74, both hemispheres 135.2
1963 Male, age 80, left hemisphere 112.4
2113 Female, age 91, right hemisphere 97.7
Hippocampus, CA3
nTPM: 135.4
2137 Male, age 80, left hemisphere 175.8
1867 Male, age 76, both hemispheres 169.7
1891 Female, age 85, both hemispheres 155.0
2620 Female, age 94, left hemisphere 114.9
2861 Female, age 67, both hemispheres 104.8
2436 Male, age 74, both hemispheres 92.4
Parahippocampal cortex
nTPM: 143.7
2532 Female, age 72, left hemisphere 182.8
1933 Female, age 85, both hemispheres 180.9
1850 Male, age 80, both hemispheres 163.6
1990 Female, age 91, right hemisphere 157.4
2245 Female, age 91, both hemispheres 143.5
2692 Male, age 74, both hemispheres 131.8
2250 Female, age 67, right hemisphere 127.1
2622 Female, age 67, right hemisphere 118.3
2693 Female, age 94, both hemispheres 116.3
2018 Male, age 76, both hemispheres 115.0
Perirhinal gyrus
nTPM: 159.7
1847 Female, age 91, left hemisphere 167.3
2521 Female, age 94, right hemisphere 166.6
1841 Female, age 85, right hemisphere 165.8
1794 Male, age 80, right hemisphere 156.4
2848 Male, age 76, right hemisphere 142.3
Subiculum
nTPM: 161.6
1977 Female, age 85, both hemispheres 213.9
1901 Male, age 80, both hemispheres 209.7
2042 Male, age 76, both hemispheres 177.1
2438 Female, age 94, left hemisphere 158.0
2619 Male, age 74, both hemispheres 117.2
2729 Female, age 91, right hemisphere 93.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 191.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 191.7
Samples: 255

Max nTPM: 616.7
Min nTPM: 44.0
Std nTPM: 86.5
Median nTPM: 173.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 616.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 529.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 460.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 436.4
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 422.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 394.9
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 390.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 388.5
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 378.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 368.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 360.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 81.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.1
FF:10153-102I9 76 years, female 82.3
FF:10169-103B7 60 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 210.8
Pig sample Sample description nTPM
Subiculum
nTPM: 152.5
Samples: 4

Max nTPM: 191.6
Min nTPM: 125.4
Sample A Female 191.6
Sample B Female 148.4
Sample C Male 125.4
Sample D Male 144.6
Dorsal hippocampus
nTPM: 210.8
Samples: 4

Max nTPM: 302.8
Min nTPM: 106.0
Sample A Female 302.8
Sample B Female 166.5
Sample C Male 267.9
Sample D Male 106.0
Entorhinal cortex
nTPM: 177.8
Samples: 4

Max nTPM: 189.0
Min nTPM: 167.4
Sample A Female 180.1
Sample B Female 189.0
Sample C Male 167.4
Sample D Male 174.6
Ventral hippocampus
nTPM: 137.0
Samples: 4

Max nTPM: 181.8
Min nTPM: 101.2
Sample A Female 134.4
Sample B Female 101.2
Sample C Male 130.7
Sample D Male 181.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 315.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 315.8
Samples: 4

Max nTPM: 358.6
Min nTPM: 285.7
Sample A Male 326.4
Sample B Male 358.6
Sample C Female 292.5
Sample D Female 285.7
Hippocampal formation
nTPM: 269.8
Samples: 4

Max nTPM: 291.1
Min nTPM: 248.3
Sample A Male 284.4
Sample B Male 248.3
Sample C Female 291.1
Sample D Female 255.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
1007 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 9.4
1006 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 8.9
1008 Sense, RPS_Baylor_37084, Mouse strain C57BL/6J (56 days, male) 0.9

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