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  • TISSUE

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  • STMN4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:141.8 nTPM
HPA Brain:194.0 nTPM
GTEx:141.8 nTPM
Pig:161.4 nTPM
Mouse:193.8 nTPM
Allen mouse:5.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 192.9
2226 Male, age 75, left hemisphere 271.7
1961 Female, age 42, unknown 114.1
Dorsomedial nucleus
nTPM: 104.4
1989 Male, age 62, unknown 121.4
2017 Female, age 42, unknown 116.8
2041 Female, age 72, unknown 75.0
Lateral hypothalamic area
nTPM: 194.0
2228 Male, age 66, unknown 312.1
2271 Male, age 75, both hemispheres 267.7
1791 Male, age 80, right hemisphere 122.0
2412 Male, age 62, unknown 74.1
Mammillary body
nTPM: 152.4
1945 Male, age 80, right hemisphere 180.5
1948 Female, age 72, unknown 162.6
1923 Female, age 72, unknown 152.7
1834 Female, age 42, unknown 135.7
2413 Male, age 66, unknown 130.7
Paraventricular nucleus
nTPM: 155.1
2700 Male, age 62, unknown 155.1
Preoptic area
nTPM: 115.8
2414 Female, age 72, unknown 154.1
1861 Female, age 42, unknown 106.7
1907 Male, age 80, right hemisphere 86.8
Supraoptic nucleus
nTPM: 114.1
2043 Male, age 62, unknown 150.5
1894 Female, age 72, unknown 103.7
2835 Female, age 72, unknown 88.2
Ventromedial nucleus
nTPM: 85.7
1822 Female, age 42, unknown 87.6
1982 Female, age 72, unknown 83.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 141.8
Samples: 257

Max nTPM: 513.6
Min nTPM: 33.1
Std nTPM: 70.8
Median nTPM: 125.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 513.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 402.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 388.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 348.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 346.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 345.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 341.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 329.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 318.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 313.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 300.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 286.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 283.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 278.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 270.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 269.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 267.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 264.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 264.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 258.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 253.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 250.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 247.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 244.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 234.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 234.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 231.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 227.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 224.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 223.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 223.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 222.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 222.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 222.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 220.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 218.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 217.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 215.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 211.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 209.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 209.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 208.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 207.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 206.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 202.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 193.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 190.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 188.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 188.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 185.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 184.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 184.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 184.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 184.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 182.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 179.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 173.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 173.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 171.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 171.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 169.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 167.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 167.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 166.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 165.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 165.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 165.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 163.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 161.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 160.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 159.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 159.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 158.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 158.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 158.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 156.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 156.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 155.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 155.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 154.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 154.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 154.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 153.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 152.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 152.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 150.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 149.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 149.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 147.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 147.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 146.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 143.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 142.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 142.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 142.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 142.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 141.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 140.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 139.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 139.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 138.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 138.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 137.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 137.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 136.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 136.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 135.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 135.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 134.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 134.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 133.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 132.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 131.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 131.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 131.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 131.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 130.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 130.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 129.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 129.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 128.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 127.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 127.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 127.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 127.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 126.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 125.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 125.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 124.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 123.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 122.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 122.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 121.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 120.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 119.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 119.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 118.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 118.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 117.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 117.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 115.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 115.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 114.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 114.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 113.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 113.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 112.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 112.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 112.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 112.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 112.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 111.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 111.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 111.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 110.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 110.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 110.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 109.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 109.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 107.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 106.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 106.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 106.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 104.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 104.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 103.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 103.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 102.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 102.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 101.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 101.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 101.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 101.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 101.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 100.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 99.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 99.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 99.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 99.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 98.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 98.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 98.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 98.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 98.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 97.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 96.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 96.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 96.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 96.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 96.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 96.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 95.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 95.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 94.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 93.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 93.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 93.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 92.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 92.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 92.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 90.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 90.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 89.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 89.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 88.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 88.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 88.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 88.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 88.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 85.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 84.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 84.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 83.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 83.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 82.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 82.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 81.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 81.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 81.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 81.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 80.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 80.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 79.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 78.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 78.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 77.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 77.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 77.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 76.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 76.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 75.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 74.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 74.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 73.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 72.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 72.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 71.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 71.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 69.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 68.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 67.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 67.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 64.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 63.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 63.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 62.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 62.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 56.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 48.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 47.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 46.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 45.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 44.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 37.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 33.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 161.4
Samples: 4

Max nTPM: 200.0
Min nTPM: 98.5
Sample A Female 200.0
Sample B Female 183.6
Sample C Male 163.4
Sample D Male 98.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 193.8
Samples: 4

Max nTPM: 203.1
Min nTPM: 177.0
Sample A Male 177.0
Sample B Male 198.8
Sample C Female 203.1
Sample D Female 196.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.0
1007 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 8.8
1006 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 7.6
1008 Sense, RPS_Baylor_37084, Mouse strain C57BL/6J (56 days, male) 1.2

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